Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS16765

Experiment: growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS16760 and SGL_RS16765 are separated by 182 nucleotidesSGL_RS16765 and SGL_RS16770 are separated by 144 nucleotides SGL_RS16760: SGL_RS16760 - DUF3598 family protein, at 3,219,158 to 3,219,979 _RS16760 SGL_RS16765: SGL_RS16765 - aldo/keto reductase, at 3,220,162 to 3,221,106 _RS16765 SGL_RS16770: SGL_RS16770 - LptF/LptG family permease, at 3,221,251 to 3,222,432 _RS16770 Position (kb) 3220 3221 3222Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3219.166 kb on - strandat 3219.255 kb on - strand, within SGL_RS16760at 3219.425 kb on - strand, within SGL_RS16760at 3219.468 kb on - strand, within SGL_RS16760at 3219.476 kb on - strand, within SGL_RS16760at 3219.504 kb on + strand, within SGL_RS16760at 3219.504 kb on + strand, within SGL_RS16760at 3219.512 kb on - strand, within SGL_RS16760at 3219.512 kb on - strand, within SGL_RS16760at 3219.512 kb on - strand, within SGL_RS16760at 3219.538 kb on + strand, within SGL_RS16760at 3219.612 kb on - strand, within SGL_RS16760at 3219.640 kb on - strand, within SGL_RS16760at 3219.709 kb on + strand, within SGL_RS16760at 3219.776 kb on - strand, within SGL_RS16760at 3220.169 kb on + strandat 3220.209 kb on + strandat 3220.224 kb on + strandat 3220.242 kb on + strandat 3220.242 kb on + strandat 3220.263 kb on - strand, within SGL_RS16765at 3220.308 kb on - strand, within SGL_RS16765at 3220.448 kb on + strand, within SGL_RS16765at 3220.458 kb on + strand, within SGL_RS16765at 3220.464 kb on + strand, within SGL_RS16765at 3220.663 kb on + strand, within SGL_RS16765at 3221.355 kb on + strandat 3221.384 kb on - strand, within SGL_RS16770at 3221.521 kb on - strand, within SGL_RS16770at 3221.583 kb on - strand, within SGL_RS16770

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation
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3,219,166 - +0.1
3,219,255 - SGL_RS16760 0.12 -0.1
3,219,425 - SGL_RS16760 0.32 +0.3
3,219,468 - SGL_RS16760 0.38 -0.2
3,219,476 - SGL_RS16760 0.39 -0.1
3,219,504 + SGL_RS16760 0.42 -0.0
3,219,504 + SGL_RS16760 0.42 -1.0
3,219,512 - SGL_RS16760 0.43 +0.3
3,219,512 - SGL_RS16760 0.43 -0.2
3,219,512 - SGL_RS16760 0.43 +0.7
3,219,538 + SGL_RS16760 0.46 +0.3
3,219,612 - SGL_RS16760 0.55 +0.2
3,219,640 - SGL_RS16760 0.59 -0.6
3,219,709 + SGL_RS16760 0.67 -0.2
3,219,776 - SGL_RS16760 0.75 -0.8
3,220,169 + +0.2
3,220,209 + -0.2
3,220,224 + -1.7
3,220,242 + +0.4
3,220,242 + -0.7
3,220,263 - SGL_RS16765 0.11 +0.4
3,220,308 - SGL_RS16765 0.15 +0.1
3,220,448 + SGL_RS16765 0.30 +0.3
3,220,458 + SGL_RS16765 0.31 +0.1
3,220,464 + SGL_RS16765 0.32 -1.0
3,220,663 + SGL_RS16765 0.53 -0.1
3,221,355 + -1.7
3,221,384 - SGL_RS16770 0.11 -4.1
3,221,521 - SGL_RS16770 0.23 -3.2
3,221,583 - SGL_RS16770 0.28 -3.3

Or see this region's nucleotide sequence