Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13655

Experiment: growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS13645 and SGL_RS19020 are separated by 40 nucleotidesSGL_RS19020 and SGL_RS13655 are separated by 42 nucleotidesSGL_RS13655 and SGL_RS13660 are separated by 31 nucleotides SGL_RS13645: SGL_RS13645 - hypothetical protein, at 2,533,856 to 2,534,065 _RS13645 SGL_RS19020: SGL_RS19020 - IS630-like element ISTcSa family transposase, at 2,534,106 to 2,534,954 _RS19020 SGL_RS13655: SGL_RS13655 - DNA-3-methyladenine glycosylase, at 2,534,997 to 2,535,455 _RS13655 SGL_RS13660: SGL_RS13660 - lipid-A-disaccharide synthase-related protein, at 2,535,487 to 2,536,758 _RS13660 Position (kb) 2534 2535 2536Strain fitness (log2 ratio) -1 0 1at 2535.045 kb on + strand, within SGL_RS13655at 2535.238 kb on - strand, within SGL_RS13655

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation
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2,535,045 + SGL_RS13655 0.10 +0.5
2,535,238 - SGL_RS13655 0.53 -0.0

Or see this region's nucleotide sequence