Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18175 and SGL_RS18180 are separated by 7 nucleotides SGL_RS18180 and SGL_RS18185 are separated by 129 nucleotides SGL_RS18185 and SGL_RS18190 are separated by 199 nucleotides
SGL_RS18175: SGL_RS18175 - homocysteine S-methyltransferase family protein, at 3,530,030 to 3,530,971
_RS18175
SGL_RS18180: SGL_RS18180 - ABC transporter permease, at 3,530,979 to 3,531,755
_RS18180
SGL_RS18185: SGL_RS18185 - DUF1269 domain-containing protein, at 3,531,885 to 3,532,400
_RS18185
SGL_RS18190: SGL_RS18190 - NAD(P)-dependent alcohol dehydrogenase, at 3,532,600 to 3,533,610
_RS18190
Position (kb)
3531
3532
3533 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3531.056 kb on - strand at 3531.133 kb on - strand, within SGL_RS18180 at 3531.494 kb on + strand, within SGL_RS18180 at 3531.538 kb on - strand, within SGL_RS18180 at 3531.586 kb on - strand, within SGL_RS18180 at 3531.652 kb on - strand, within SGL_RS18180 at 3531.885 kb on - strand at 3531.934 kb on + strand at 3532.238 kb on + strand, within SGL_RS18185 at 3532.258 kb on - strand, within SGL_RS18185 at 3532.269 kb on - strand, within SGL_RS18185 at 3532.291 kb on - strand, within SGL_RS18185 at 3532.508 kb on - strand at 3532.519 kb on + strand at 3532.547 kb on + strand at 3532.555 kb on - strand at 3532.608 kb on + strand at 3532.608 kb on + strand at 3532.639 kb on + strand at 3532.679 kb on - strand at 3532.701 kb on + strand, within SGL_RS18190 at 3532.709 kb on - strand, within SGL_RS18190 at 3532.709 kb on - strand, within SGL_RS18190 at 3532.709 kb on - strand, within SGL_RS18190 at 3532.711 kb on - strand, within SGL_RS18190 at 3532.711 kb on - strand, within SGL_RS18190 at 3532.786 kb on - strand, within SGL_RS18190 at 3533.014 kb on + strand, within SGL_RS18190 at 3533.019 kb on + strand, within SGL_RS18190 at 3533.022 kb on - strand, within SGL_RS18190 at 3533.022 kb on - strand, within SGL_RS18190 at 3533.022 kb on - strand, within SGL_RS18190 at 3533.063 kb on + strand, within SGL_RS18190 at 3533.122 kb on + strand, within SGL_RS18190 at 3533.184 kb on - strand, within SGL_RS18190 at 3533.222 kb on + strand, within SGL_RS18190 at 3533.308 kb on - strand, within SGL_RS18190 at 3533.374 kb on - strand, within SGL_RS18190 at 3533.377 kb on + strand, within SGL_RS18190
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 3,531,056 - -2.3 3,531,133 - SGL_RS18180 0.20 -3.0 3,531,494 + SGL_RS18180 0.66 -0.8 3,531,538 - SGL_RS18180 0.72 -4.4 3,531,586 - SGL_RS18180 0.78 -4.8 3,531,652 - SGL_RS18180 0.87 -2.6 3,531,885 - -0.1 3,531,934 + -0.1 3,532,238 + SGL_RS18185 0.68 +0.0 3,532,258 - SGL_RS18185 0.72 +0.4 3,532,269 - SGL_RS18185 0.74 +0.1 3,532,291 - SGL_RS18185 0.79 +0.5 3,532,508 - +0.7 3,532,519 + -0.6 3,532,547 + -0.0 3,532,555 - -0.2 3,532,608 + +0.3 3,532,608 + +0.3 3,532,639 + +0.7 3,532,679 - +0.2 3,532,701 + SGL_RS18190 0.10 -0.5 3,532,709 - SGL_RS18190 0.11 +0.6 3,532,709 - SGL_RS18190 0.11 +0.1 3,532,709 - SGL_RS18190 0.11 +0.3 3,532,711 - SGL_RS18190 0.11 +0.5 3,532,711 - SGL_RS18190 0.11 -0.5 3,532,786 - SGL_RS18190 0.18 +0.2 3,533,014 + SGL_RS18190 0.41 +0.5 3,533,019 + SGL_RS18190 0.41 -0.0 3,533,022 - SGL_RS18190 0.42 -0.0 3,533,022 - SGL_RS18190 0.42 +0.8 3,533,022 - SGL_RS18190 0.42 +0.1 3,533,063 + SGL_RS18190 0.46 -0.2 3,533,122 + SGL_RS18190 0.52 +0.3 3,533,184 - SGL_RS18190 0.58 -0.9 3,533,222 + SGL_RS18190 0.62 +0.3 3,533,308 - SGL_RS18190 0.70 +0.2 3,533,374 - SGL_RS18190 0.77 +0.1 3,533,377 + SGL_RS18190 0.77 +0.1
Or see this region's nucleotide sequence