Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17925 and SGL_RS17930 are separated by 220 nucleotides SGL_RS17930 and SGL_RS17935 are separated by 66 nucleotides SGL_RS17935 and SGL_RS17940 are separated by 128 nucleotides SGL_RS17940 and SGL_RS17945 are separated by 15 nucleotides
SGL_RS17925: SGL_RS17925 - hypothetical protein, at 3,476,059 to 3,476,595
_RS17925
SGL_RS17930: SGL_RS17930 - fimbria/pilus periplasmic chaperone, at 3,476,816 to 3,477,484
_RS17930
SGL_RS17935: SGL_RS17935 - hypothetical protein, at 3,477,551 to 3,477,754
_RS17935
SGL_RS17940: SGL_RS17940 - hypothetical protein, at 3,477,883 to 3,478,116
_RS17940
SGL_RS17945: SGL_RS17945 - DUF2887 domain-containing protein, at 3,478,132 to 3,479,034
_RS17945
Position (kb)
3477
3478 Strain fitness (log2 ratio)
-1
0
1 at 3476.626 kb on + strand at 3476.800 kb on - strand at 3476.833 kb on - strand at 3476.945 kb on - strand, within SGL_RS17930 at 3476.950 kb on + strand, within SGL_RS17930 at 3476.950 kb on + strand, within SGL_RS17930 at 3476.950 kb on + strand, within SGL_RS17930 at 3477.018 kb on + strand, within SGL_RS17930 at 3477.132 kb on + strand, within SGL_RS17930 at 3477.192 kb on + strand, within SGL_RS17930 at 3477.202 kb on - strand, within SGL_RS17930 at 3477.237 kb on + strand, within SGL_RS17930 at 3477.302 kb on - strand, within SGL_RS17930 at 3477.635 kb on + strand, within SGL_RS17935 at 3477.680 kb on + strand, within SGL_RS17935 at 3477.774 kb on - strand at 3477.979 kb on + strand, within SGL_RS17940 at 3478.153 kb on - strand at 3478.282 kb on - strand, within SGL_RS17945 at 3478.395 kb on + strand, within SGL_RS17945 at 3478.420 kb on - strand, within SGL_RS17945 at 3478.555 kb on + strand, within SGL_RS17945 at 3478.615 kb on + strand, within SGL_RS17945 at 3478.655 kb on + strand, within SGL_RS17945 at 3478.667 kb on - strand, within SGL_RS17945 at 3478.741 kb on + strand, within SGL_RS17945
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 3,476,626 + +0.0 3,476,800 - -0.4 3,476,833 - -0.1 3,476,945 - SGL_RS17930 0.19 +0.1 3,476,950 + SGL_RS17930 0.20 -0.2 3,476,950 + SGL_RS17930 0.20 -0.9 3,476,950 + SGL_RS17930 0.20 -0.2 3,477,018 + SGL_RS17930 0.30 +0.3 3,477,132 + SGL_RS17930 0.47 +0.3 3,477,192 + SGL_RS17930 0.56 +0.1 3,477,202 - SGL_RS17930 0.58 -0.3 3,477,237 + SGL_RS17930 0.63 +0.1 3,477,302 - SGL_RS17930 0.73 -0.9 3,477,635 + SGL_RS17935 0.41 -0.8 3,477,680 + SGL_RS17935 0.63 +0.8 3,477,774 - -0.3 3,477,979 + SGL_RS17940 0.41 +0.2 3,478,153 - +0.2 3,478,282 - SGL_RS17945 0.17 +1.0 3,478,395 + SGL_RS17945 0.29 +0.1 3,478,420 - SGL_RS17945 0.32 -0.4 3,478,555 + SGL_RS17945 0.47 -0.1 3,478,615 + SGL_RS17945 0.53 -0.2 3,478,655 + SGL_RS17945 0.58 +0.2 3,478,667 - SGL_RS17945 0.59 +0.2 3,478,741 + SGL_RS17945 0.67 +0.2
Or see this region's nucleotide sequence