Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17315 and SGL_RS17320 are separated by 36 nucleotides SGL_RS17320 and SGL_RS17325 overlap by 4 nucleotides SGL_RS17325 and SGL_RS17330 are separated by 297 nucleotides
SGL_RS17315: SGL_RS17315 - class I SAM-dependent methyltransferase, at 3,341,166 to 3,341,843
_RS17315
SGL_RS17320: SGL_RS17320 - hypothetical protein, at 3,341,880 to 3,342,128
_RS17320
SGL_RS17325: SGL_RS17325 - putative toxin-antitoxin system toxin component, PIN family, at 3,342,125 to 3,342,559
_RS17325
SGL_RS17330: SGL_RS17330 - biosynthetic arginine decarboxylase, at 3,342,857 to 3,344,944
_RS17330
Position (kb)
3342
3343 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3341.275 kb on - strand, within SGL_RS17315 at 3341.482 kb on - strand, within SGL_RS17315 at 3341.482 kb on - strand, within SGL_RS17315 at 3341.506 kb on - strand, within SGL_RS17315 at 3341.525 kb on + strand, within SGL_RS17315 at 3341.586 kb on + strand, within SGL_RS17315 at 3341.655 kb on + strand, within SGL_RS17315 at 3341.768 kb on - strand, within SGL_RS17315 at 3342.219 kb on - strand, within SGL_RS17325 at 3342.254 kb on + strand, within SGL_RS17325 at 3342.763 kb on + strand at 3342.840 kb on - strand at 3342.918 kb on + strand at 3342.918 kb on + strand at 3342.974 kb on + strand at 3342.988 kb on - strand at 3342.993 kb on + strand at 3343.003 kb on - strand at 3343.095 kb on + strand, within SGL_RS17330 at 3343.131 kb on - strand, within SGL_RS17330 at 3343.361 kb on - strand, within SGL_RS17330 at 3343.400 kb on - strand, within SGL_RS17330 at 3343.402 kb on - strand, within SGL_RS17330 at 3343.407 kb on - strand, within SGL_RS17330 at 3343.412 kb on - strand, within SGL_RS17330
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 3,341,275 - SGL_RS17315 0.16 -0.9 3,341,482 - SGL_RS17315 0.47 -0.1 3,341,482 - SGL_RS17315 0.47 -1.2 3,341,506 - SGL_RS17315 0.50 +0.1 3,341,525 + SGL_RS17315 0.53 -1.2 3,341,586 + SGL_RS17315 0.62 +0.1 3,341,655 + SGL_RS17315 0.72 +0.2 3,341,768 - SGL_RS17315 0.89 -0.9 3,342,219 - SGL_RS17325 0.22 +0.2 3,342,254 + SGL_RS17325 0.30 +0.7 3,342,763 + -0.1 3,342,840 - +0.2 3,342,918 + -3.4 3,342,918 + -2.6 3,342,974 + -0.2 3,342,988 - -1.5 3,342,993 + -4.0 3,343,003 - -3.4 3,343,095 + SGL_RS17330 0.11 -3.8 3,343,131 - SGL_RS17330 0.13 -2.7 3,343,361 - SGL_RS17330 0.24 -2.9 3,343,400 - SGL_RS17330 0.26 -1.9 3,343,402 - SGL_RS17330 0.26 -1.5 3,343,407 - SGL_RS17330 0.26 -4.0 3,343,412 - SGL_RS17330 0.27 -1.7
Or see this region's nucleotide sequence