Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09850 and SGL_RS09855 are separated by 55 nucleotides SGL_RS09855 and SGL_RS09860 are separated by 485 nucleotides
SGL_RS09850: SGL_RS09850 - Gfo/Idh/MocA family oxidoreductase, at 1,693,546 to 1,694,661
_RS09850
SGL_RS09855: SGL_RS09855 - slipin family protein, at 1,694,717 to 1,695,400
_RS09855
SGL_RS09860: SGL_RS09860 - carotenoid biosynthesis protein, at 1,695,886 to 1,696,797
_RS09860
Position (kb)
1694
1695
1696 Strain fitness (log2 ratio)
-1
0
1 at 1693.825 kb on + strand, within SGL_RS09850 at 1693.971 kb on - strand, within SGL_RS09850 at 1693.971 kb on - strand, within SGL_RS09850 at 1694.015 kb on + strand, within SGL_RS09850 at 1694.015 kb on + strand, within SGL_RS09850 at 1694.023 kb on - strand, within SGL_RS09850 at 1694.023 kb on - strand, within SGL_RS09850 at 1694.062 kb on - strand, within SGL_RS09850 at 1694.067 kb on - strand, within SGL_RS09850 at 1694.098 kb on + strand, within SGL_RS09850 at 1694.105 kb on - strand, within SGL_RS09850 at 1694.158 kb on - strand, within SGL_RS09850 at 1694.209 kb on - strand, within SGL_RS09850 at 1694.267 kb on - strand, within SGL_RS09850 at 1694.312 kb on - strand, within SGL_RS09850 at 1694.331 kb on + strand, within SGL_RS09850 at 1694.524 kb on + strand, within SGL_RS09850 at 1694.524 kb on + strand, within SGL_RS09850 at 1694.532 kb on - strand, within SGL_RS09850 at 1694.759 kb on + strand at 1694.883 kb on - strand, within SGL_RS09855 at 1695.078 kb on - strand, within SGL_RS09855 at 1695.657 kb on - strand at 1695.747 kb on + strand at 1695.916 kb on - strand at 1695.993 kb on - strand, within SGL_RS09860 at 1696.044 kb on + strand, within SGL_RS09860 at 1696.178 kb on + strand, within SGL_RS09860 at 1696.178 kb on + strand, within SGL_RS09860
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 1,693,825 + SGL_RS09850 0.25 +0.2 1,693,971 - SGL_RS09850 0.38 +0.6 1,693,971 - SGL_RS09850 0.38 -0.2 1,694,015 + SGL_RS09850 0.42 -0.1 1,694,015 + SGL_RS09850 0.42 +0.3 1,694,023 - SGL_RS09850 0.43 -0.1 1,694,023 - SGL_RS09850 0.43 -0.0 1,694,062 - SGL_RS09850 0.46 +0.4 1,694,067 - SGL_RS09850 0.47 -0.6 1,694,098 + SGL_RS09850 0.49 -0.4 1,694,105 - SGL_RS09850 0.50 +0.9 1,694,158 - SGL_RS09850 0.55 +0.4 1,694,209 - SGL_RS09850 0.59 +0.3 1,694,267 - SGL_RS09850 0.65 -0.3 1,694,312 - SGL_RS09850 0.69 +0.6 1,694,331 + SGL_RS09850 0.70 -0.4 1,694,524 + SGL_RS09850 0.88 -0.1 1,694,524 + SGL_RS09850 0.88 -0.0 1,694,532 - SGL_RS09850 0.88 -1.7 1,694,759 + +0.5 1,694,883 - SGL_RS09855 0.24 +0.5 1,695,078 - SGL_RS09855 0.53 +0.2 1,695,657 - -1.2 1,695,747 + +0.3 1,695,916 - -0.2 1,695,993 - SGL_RS09860 0.12 +0.1 1,696,044 + SGL_RS09860 0.17 -0.1 1,696,178 + SGL_RS09860 0.32 +0.1 1,696,178 + SGL_RS09860 0.32 -1.0
Or see this region's nucleotide sequence