Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS09020

Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS09010 and SGL_RS09015 are separated by 41 nucleotidesSGL_RS09015 and SGL_RS09020 overlap by 4 nucleotidesSGL_RS09020 and SGL_RS09025 are separated by 50 nucleotides SGL_RS09010: SGL_RS09010 - zinc ribbon domain-containing protein, at 1,525,205 to 1,526,182 _RS09010 SGL_RS09015: SGL_RS09015 - hypothetical protein, at 1,526,224 to 1,527,174 _RS09015 SGL_RS09020: SGL_RS09020 - zinc ribbon domain-containing protein, at 1,527,171 to 1,528,421 _RS09020 SGL_RS09025: SGL_RS09025 - hypothetical protein, at 1,528,472 to 1,530,568 _RS09025 Position (kb) 1527 1528 1529Strain fitness (log2 ratio) -1 0 1at 1526.346 kb on + strand, within SGL_RS09015at 1526.356 kb on + strand, within SGL_RS09015at 1526.356 kb on + strand, within SGL_RS09015at 1526.376 kb on - strand, within SGL_RS09015at 1526.583 kb on + strand, within SGL_RS09015at 1526.583 kb on + strand, within SGL_RS09015at 1526.583 kb on + strand, within SGL_RS09015at 1526.673 kb on + strand, within SGL_RS09015at 1526.773 kb on + strand, within SGL_RS09015at 1526.776 kb on - strand, within SGL_RS09015at 1526.781 kb on - strand, within SGL_RS09015at 1526.923 kb on + strand, within SGL_RS09015at 1526.940 kb on - strand, within SGL_RS09015at 1527.011 kb on + strand, within SGL_RS09015at 1527.025 kb on + strand, within SGL_RS09015at 1527.025 kb on + strand, within SGL_RS09015at 1527.033 kb on - strand, within SGL_RS09015at 1527.471 kb on - strand, within SGL_RS09020at 1527.758 kb on + strand, within SGL_RS09020at 1527.840 kb on + strand, within SGL_RS09020at 1527.840 kb on + strand, within SGL_RS09020at 1528.114 kb on + strand, within SGL_RS09020at 1528.139 kb on + strand, within SGL_RS09020at 1528.763 kb on + strand, within SGL_RS09025at 1528.786 kb on - strand, within SGL_RS09025at 1528.880 kb on + strand, within SGL_RS09025at 1529.031 kb on - strand, within SGL_RS09025at 1529.215 kb on - strand, within SGL_RS09025at 1529.370 kb on - strand, within SGL_RS09025at 1529.415 kb on + strand, within SGL_RS09025

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
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1,526,346 + SGL_RS09015 0.13 -0.1
1,526,356 + SGL_RS09015 0.14 -0.0
1,526,356 + SGL_RS09015 0.14 +0.9
1,526,376 - SGL_RS09015 0.16 -0.3
1,526,583 + SGL_RS09015 0.38 -0.7
1,526,583 + SGL_RS09015 0.38 +0.5
1,526,583 + SGL_RS09015 0.38 -0.2
1,526,673 + SGL_RS09015 0.47 -0.2
1,526,773 + SGL_RS09015 0.58 -0.3
1,526,776 - SGL_RS09015 0.58 +0.4
1,526,781 - SGL_RS09015 0.59 +0.1
1,526,923 + SGL_RS09015 0.74 +0.0
1,526,940 - SGL_RS09015 0.75 -0.0
1,527,011 + SGL_RS09015 0.83 -0.2
1,527,025 + SGL_RS09015 0.84 -0.2
1,527,025 + SGL_RS09015 0.84 -0.2
1,527,033 - SGL_RS09015 0.85 -0.3
1,527,471 - SGL_RS09020 0.24 +0.3
1,527,758 + SGL_RS09020 0.47 +0.0
1,527,840 + SGL_RS09020 0.53 +0.7
1,527,840 + SGL_RS09020 0.53 +0.3
1,528,114 + SGL_RS09020 0.75 -0.2
1,528,139 + SGL_RS09020 0.77 +0.5
1,528,763 + SGL_RS09025 0.14 +0.2
1,528,786 - SGL_RS09025 0.15 -0.1
1,528,880 + SGL_RS09025 0.19 +0.1
1,529,031 - SGL_RS09025 0.27 -0.5
1,529,215 - SGL_RS09025 0.35 -0.4
1,529,370 - SGL_RS09025 0.43 +0.2
1,529,415 + SGL_RS09025 0.45 -0.2

Or see this region's nucleotide sequence