Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08045 and SGL_RS08055 are separated by 293 nucleotides SGL_RS08055 and SGL_RS08060 are separated by 12 nucleotides SGL_RS08060 and SGL_RS08065 are separated by 163 nucleotides
SGL_RS08045: SGL_RS08045 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 1,319,546 to 1,320,541
_RS08045
SGL_RS08055: SGL_RS08055 - two-component system response regulator, at 1,320,835 to 1,321,839
_RS08055
SGL_RS08060: SGL_RS08060 - energy-coupling factor ABC transporter ATP-binding protein, at 1,321,852 to 1,322,523
_RS08060
SGL_RS08065: SGL_RS08065 - homogentisate phytyltransferase, at 1,322,687 to 1,323,613
_RS08065
Position (kb)
1320
1321
1322 Strain fitness (log2 ratio)
-2
-1
0
1 at 1319.918 kb on + strand, within SGL_RS08045 at 1319.990 kb on + strand, within SGL_RS08045 at 1319.997 kb on + strand, within SGL_RS08045 at 1320.009 kb on + strand, within SGL_RS08045 at 1320.019 kb on - strand, within SGL_RS08045 at 1320.066 kb on + strand, within SGL_RS08045 at 1320.074 kb on - strand, within SGL_RS08045 at 1320.145 kb on - strand, within SGL_RS08045 at 1320.173 kb on - strand, within SGL_RS08045 at 1320.180 kb on - strand, within SGL_RS08045 at 1320.287 kb on - strand, within SGL_RS08045 at 1320.441 kb on - strand, within SGL_RS08045 at 1320.595 kb on - strand at 1320.762 kb on + strand at 1320.830 kb on - strand at 1320.830 kb on - strand at 1320.830 kb on - strand at 1320.830 kb on - strand at 1320.997 kb on + strand, within SGL_RS08055 at 1321.068 kb on + strand, within SGL_RS08055 at 1321.068 kb on + strand, within SGL_RS08055 at 1321.085 kb on - strand, within SGL_RS08055 at 1321.135 kb on - strand, within SGL_RS08055 at 1321.135 kb on - strand, within SGL_RS08055 at 1321.197 kb on - strand, within SGL_RS08055 at 1321.240 kb on + strand, within SGL_RS08055 at 1321.293 kb on - strand, within SGL_RS08055 at 1321.302 kb on + strand, within SGL_RS08055 at 1321.360 kb on - strand, within SGL_RS08055 at 1321.365 kb on - strand, within SGL_RS08055 at 1321.378 kb on + strand, within SGL_RS08055 at 1321.536 kb on + strand, within SGL_RS08055 at 1321.897 kb on - strand at 1322.536 kb on + strand at 1322.611 kb on - strand at 1322.641 kb on + strand at 1322.744 kb on + strand at 1322.770 kb on - strand at 1322.799 kb on - strand, within SGL_RS08065
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 1,319,918 + SGL_RS08045 0.37 +0.5 1,319,990 + SGL_RS08045 0.45 -0.0 1,319,997 + SGL_RS08045 0.45 +0.1 1,320,009 + SGL_RS08045 0.46 -0.0 1,320,019 - SGL_RS08045 0.47 -0.0 1,320,066 + SGL_RS08045 0.52 +0.6 1,320,074 - SGL_RS08045 0.53 -0.0 1,320,145 - SGL_RS08045 0.60 +0.2 1,320,173 - SGL_RS08045 0.63 -0.1 1,320,180 - SGL_RS08045 0.64 +0.2 1,320,287 - SGL_RS08045 0.74 -0.9 1,320,441 - SGL_RS08045 0.90 -0.3 1,320,595 - +0.1 1,320,762 + -0.1 1,320,830 - +0.6 1,320,830 - -0.1 1,320,830 - -0.9 1,320,830 - -0.2 1,320,997 + SGL_RS08055 0.16 +1.2 1,321,068 + SGL_RS08055 0.23 -0.0 1,321,068 + SGL_RS08055 0.23 +0.6 1,321,085 - SGL_RS08055 0.25 +0.4 1,321,135 - SGL_RS08055 0.30 +0.0 1,321,135 - SGL_RS08055 0.30 +1.0 1,321,197 - SGL_RS08055 0.36 -0.1 1,321,240 + SGL_RS08055 0.40 +0.1 1,321,293 - SGL_RS08055 0.46 +0.1 1,321,302 + SGL_RS08055 0.46 +0.1 1,321,360 - SGL_RS08055 0.52 -0.2 1,321,365 - SGL_RS08055 0.53 +0.3 1,321,378 + SGL_RS08055 0.54 +0.6 1,321,536 + SGL_RS08055 0.70 +0.0 1,321,897 - +0.7 1,322,536 + -1.9 1,322,611 - -0.2 1,322,641 + -0.2 1,322,744 + +0.2 1,322,770 - +0.5 1,322,799 - SGL_RS08065 0.12 +0.1
Or see this region's nucleotide sequence