Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07090 and SGL_RS07095 are separated by 347 nucleotides SGL_RS07095 and SGL_RS07100 are separated by 513 nucleotides
SGL_RS07090: SGL_RS07090 - ABC transporter permease subunit, at 1,114,429 to 1,116,012
_RS07090
SGL_RS07095: SGL_RS07095 - phasin PhaP, at 1,116,360 to 1,116,629
_RS07095
SGL_RS07100: SGL_RS07100 - glycogen/starch/alpha-glucan phosphorylase, at 1,117,143 to 1,119,674
_RS07100
Position (kb)
1116
1117 Strain fitness (log2 ratio)
-1
0
1 at 1115.389 kb on + strand, within SGL_RS07090 at 1115.416 kb on + strand, within SGL_RS07090 at 1115.421 kb on + strand, within SGL_RS07090 at 1115.452 kb on - strand, within SGL_RS07090 at 1115.475 kb on - strand, within SGL_RS07090 at 1115.621 kb on + strand, within SGL_RS07090 at 1115.676 kb on + strand, within SGL_RS07090 at 1115.676 kb on + strand, within SGL_RS07090 at 1115.684 kb on - strand, within SGL_RS07090 at 1115.709 kb on + strand, within SGL_RS07090 at 1115.766 kb on - strand, within SGL_RS07090 at 1115.776 kb on + strand, within SGL_RS07090 at 1115.784 kb on - strand, within SGL_RS07090 at 1115.784 kb on - strand, within SGL_RS07090 at 1115.960 kb on + strand at 1116.016 kb on + strand at 1116.469 kb on + strand, within SGL_RS07095 at 1116.596 kb on + strand, within SGL_RS07095 at 1116.720 kb on - strand at 1116.748 kb on - strand at 1116.917 kb on + strand at 1116.952 kb on - strand at 1116.970 kb on + strand at 1116.970 kb on + strand at 1116.970 kb on + strand at 1116.970 kb on + strand at 1116.990 kb on + strand at 1117.027 kb on - strand at 1117.158 kb on + strand at 1117.288 kb on + strand at 1117.308 kb on + strand at 1117.313 kb on + strand at 1117.313 kb on + strand at 1117.313 kb on + strand at 1117.313 kb on + strand at 1117.313 kb on + strand at 1117.316 kb on - strand at 1117.435 kb on - strand, within SGL_RS07100 at 1117.502 kb on - strand, within SGL_RS07100 at 1117.546 kb on + strand, within SGL_RS07100 at 1117.621 kb on - strand, within SGL_RS07100
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 1,115,389 + SGL_RS07090 0.61 -0.2 1,115,416 + SGL_RS07090 0.62 +0.2 1,115,421 + SGL_RS07090 0.63 +0.2 1,115,452 - SGL_RS07090 0.65 -0.2 1,115,475 - SGL_RS07090 0.66 +0.5 1,115,621 + SGL_RS07090 0.75 +0.0 1,115,676 + SGL_RS07090 0.79 -0.0 1,115,676 + SGL_RS07090 0.79 +0.2 1,115,684 - SGL_RS07090 0.79 +0.1 1,115,709 + SGL_RS07090 0.81 -0.0 1,115,766 - SGL_RS07090 0.84 -0.1 1,115,776 + SGL_RS07090 0.85 -0.1 1,115,784 - SGL_RS07090 0.86 +0.3 1,115,784 - SGL_RS07090 0.86 +0.0 1,115,960 + +0.1 1,116,016 + -0.1 1,116,469 + SGL_RS07095 0.40 +0.3 1,116,596 + SGL_RS07095 0.87 +0.4 1,116,720 - -0.3 1,116,748 - -0.1 1,116,917 + -0.2 1,116,952 - +0.2 1,116,970 + +0.6 1,116,970 + -0.0 1,116,970 + +0.3 1,116,970 + -0.5 1,116,990 + +0.1 1,117,027 - +0.9 1,117,158 + -0.2 1,117,288 + -0.5 1,117,308 + -0.5 1,117,313 + +0.0 1,117,313 + -1.0 1,117,313 + +0.3 1,117,313 + +0.2 1,117,313 + -0.6 1,117,316 - +0.3 1,117,435 - SGL_RS07100 0.12 -0.5 1,117,502 - SGL_RS07100 0.14 -0.6 1,117,546 + SGL_RS07100 0.16 -0.1 1,117,621 - SGL_RS07100 0.19 -1.7
Or see this region's nucleotide sequence