Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07095

Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS07090 and SGL_RS07095 are separated by 347 nucleotidesSGL_RS07095 and SGL_RS07100 are separated by 513 nucleotides SGL_RS07090: SGL_RS07090 - ABC transporter permease subunit, at 1,114,429 to 1,116,012 _RS07090 SGL_RS07095: SGL_RS07095 - phasin PhaP, at 1,116,360 to 1,116,629 _RS07095 SGL_RS07100: SGL_RS07100 - glycogen/starch/alpha-glucan phosphorylase, at 1,117,143 to 1,119,674 _RS07100 Position (kb) 1116 1117Strain fitness (log2 ratio) -1 0 1at 1115.389 kb on + strand, within SGL_RS07090at 1115.416 kb on + strand, within SGL_RS07090at 1115.421 kb on + strand, within SGL_RS07090at 1115.452 kb on - strand, within SGL_RS07090at 1115.475 kb on - strand, within SGL_RS07090at 1115.621 kb on + strand, within SGL_RS07090at 1115.676 kb on + strand, within SGL_RS07090at 1115.676 kb on + strand, within SGL_RS07090at 1115.684 kb on - strand, within SGL_RS07090at 1115.709 kb on + strand, within SGL_RS07090at 1115.766 kb on - strand, within SGL_RS07090at 1115.776 kb on + strand, within SGL_RS07090at 1115.784 kb on - strand, within SGL_RS07090at 1115.784 kb on - strand, within SGL_RS07090at 1115.960 kb on + strandat 1116.016 kb on + strandat 1116.469 kb on + strand, within SGL_RS07095at 1116.596 kb on + strand, within SGL_RS07095at 1116.720 kb on - strandat 1116.748 kb on - strandat 1116.917 kb on + strandat 1116.952 kb on - strandat 1116.970 kb on + strandat 1116.970 kb on + strandat 1116.970 kb on + strandat 1116.970 kb on + strandat 1116.990 kb on + strandat 1117.027 kb on - strandat 1117.158 kb on + strandat 1117.288 kb on + strandat 1117.308 kb on + strandat 1117.313 kb on + strandat 1117.313 kb on + strandat 1117.313 kb on + strandat 1117.313 kb on + strandat 1117.313 kb on + strandat 1117.316 kb on - strandat 1117.435 kb on - strand, within SGL_RS07100at 1117.502 kb on - strand, within SGL_RS07100at 1117.546 kb on + strand, within SGL_RS07100at 1117.621 kb on - strand, within SGL_RS07100

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
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1,115,389 + SGL_RS07090 0.61 -0.2
1,115,416 + SGL_RS07090 0.62 +0.2
1,115,421 + SGL_RS07090 0.63 +0.2
1,115,452 - SGL_RS07090 0.65 -0.2
1,115,475 - SGL_RS07090 0.66 +0.5
1,115,621 + SGL_RS07090 0.75 +0.0
1,115,676 + SGL_RS07090 0.79 -0.0
1,115,676 + SGL_RS07090 0.79 +0.2
1,115,684 - SGL_RS07090 0.79 +0.1
1,115,709 + SGL_RS07090 0.81 -0.0
1,115,766 - SGL_RS07090 0.84 -0.1
1,115,776 + SGL_RS07090 0.85 -0.1
1,115,784 - SGL_RS07090 0.86 +0.3
1,115,784 - SGL_RS07090 0.86 +0.0
1,115,960 + +0.1
1,116,016 + -0.1
1,116,469 + SGL_RS07095 0.40 +0.3
1,116,596 + SGL_RS07095 0.87 +0.4
1,116,720 - -0.3
1,116,748 - -0.1
1,116,917 + -0.2
1,116,952 - +0.2
1,116,970 + +0.6
1,116,970 + -0.0
1,116,970 + +0.3
1,116,970 + -0.5
1,116,990 + +0.1
1,117,027 - +0.9
1,117,158 + -0.2
1,117,288 + -0.5
1,117,308 + -0.5
1,117,313 + +0.0
1,117,313 + -1.0
1,117,313 + +0.3
1,117,313 + +0.2
1,117,313 + -0.6
1,117,316 - +0.3
1,117,435 - SGL_RS07100 0.12 -0.5
1,117,502 - SGL_RS07100 0.14 -0.6
1,117,546 + SGL_RS07100 0.16 -0.1
1,117,621 - SGL_RS07100 0.19 -1.7

Or see this region's nucleotide sequence