Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06955 and SGL_RS06960 are separated by 494 nucleotides SGL_RS06960 and SGL_RS06965 are separated by 37 nucleotides SGL_RS06965 and SGL_RS06970 are separated by 66 nucleotides
SGL_RS06955: SGL_RS06955 - carbohydrate kinase, at 1,089,400 to 1,090,323
_RS06955
SGL_RS06960: SGL_RS06960 - cytochrome b, at 1,090,818 to 1,091,279
_RS06960
SGL_RS06965: SGL_RS06965 - hypothetical protein, at 1,091,317 to 1,091,631
_RS06965
SGL_RS06970: SGL_RS06970 - pentapeptide repeat-containing protein, at 1,091,698 to 1,092,894
_RS06970
Position (kb)
1091
1092 Strain fitness (log2 ratio)
-1
0
1 at 1090.570 kb on - strand at 1090.585 kb on - strand at 1090.779 kb on + strand at 1090.915 kb on + strand, within SGL_RS06960 at 1090.990 kb on + strand, within SGL_RS06960 at 1091.162 kb on - strand, within SGL_RS06960 at 1091.510 kb on + strand, within SGL_RS06965 at 1091.532 kb on + strand, within SGL_RS06965 at 1091.547 kb on - strand, within SGL_RS06965 at 1091.613 kb on + strand at 1091.776 kb on + strand at 1091.780 kb on + strand at 1091.871 kb on + strand, within SGL_RS06970 at 1091.891 kb on + strand, within SGL_RS06970 at 1091.899 kb on - strand, within SGL_RS06970 at 1091.937 kb on + strand, within SGL_RS06970 at 1091.937 kb on + strand, within SGL_RS06970 at 1091.967 kb on + strand, within SGL_RS06970 at 1091.970 kb on - strand, within SGL_RS06970 at 1091.972 kb on + strand, within SGL_RS06970 at 1091.980 kb on - strand, within SGL_RS06970 at 1092.007 kb on + strand, within SGL_RS06970 at 1092.050 kb on - strand, within SGL_RS06970 at 1092.052 kb on + strand, within SGL_RS06970 at 1092.060 kb on - strand, within SGL_RS06970 at 1092.060 kb on - strand, within SGL_RS06970 at 1092.116 kb on - strand, within SGL_RS06970 at 1092.141 kb on + strand, within SGL_RS06970 at 1092.178 kb on - strand, within SGL_RS06970 at 1092.329 kb on + strand, within SGL_RS06970 at 1092.447 kb on + strand, within SGL_RS06970 at 1092.449 kb on + strand, within SGL_RS06970 at 1092.487 kb on - strand, within SGL_RS06970 at 1092.622 kb on + strand, within SGL_RS06970
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 1,090,570 - +0.2 1,090,585 - -0.1 1,090,779 + -1.2 1,090,915 + SGL_RS06960 0.21 -0.7 1,090,990 + SGL_RS06960 0.37 +0.7 1,091,162 - SGL_RS06960 0.74 +0.2 1,091,510 + SGL_RS06965 0.61 +0.3 1,091,532 + SGL_RS06965 0.68 +0.1 1,091,547 - SGL_RS06965 0.73 +0.3 1,091,613 + +0.5 1,091,776 + -0.2 1,091,780 + +0.3 1,091,871 + SGL_RS06970 0.14 +0.0 1,091,891 + SGL_RS06970 0.16 -0.4 1,091,899 - SGL_RS06970 0.17 -0.6 1,091,937 + SGL_RS06970 0.20 +0.3 1,091,937 + SGL_RS06970 0.20 -0.2 1,091,967 + SGL_RS06970 0.22 -0.1 1,091,970 - SGL_RS06970 0.23 +0.1 1,091,972 + SGL_RS06970 0.23 +0.3 1,091,980 - SGL_RS06970 0.24 -0.0 1,092,007 + SGL_RS06970 0.26 +0.2 1,092,050 - SGL_RS06970 0.29 -0.8 1,092,052 + SGL_RS06970 0.30 +0.1 1,092,060 - SGL_RS06970 0.30 -0.3 1,092,060 - SGL_RS06970 0.30 +0.2 1,092,116 - SGL_RS06970 0.35 -0.1 1,092,141 + SGL_RS06970 0.37 +0.3 1,092,178 - SGL_RS06970 0.40 -0.1 1,092,329 + SGL_RS06970 0.53 -0.1 1,092,447 + SGL_RS06970 0.63 -0.4 1,092,449 + SGL_RS06970 0.63 +0.1 1,092,487 - SGL_RS06970 0.66 -0.5 1,092,622 + SGL_RS06970 0.77 +0.3
Or see this region's nucleotide sequence