Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06490 and SGL_RS06495 are separated by 74 nucleotides SGL_RS06495 and SGL_RS06500 are separated by 114 nucleotides SGL_RS06500 and SGL_RS06505 are separated by 6 nucleotides SGL_RS06505 and SGL_RS06510 are separated by 125 nucleotides
SGL_RS06490: SGL_RS06490 - permease, at 985,224 to 986,222
_RS06490
SGL_RS06495: SGL_RS06495 - tRNA-Leu, at 986,297 to 986,377
_RS06495
SGL_RS06500: SGL_RS06500 - glycosyltransferase family 4 protein, at 986,492 to 987,733
_RS06500
SGL_RS06505: SGL_RS06505 - twin-arginine translocase TatA/TatE family subunit, at 987,740 to 987,946
_RS06505
SGL_RS06510: SGL_RS06510 - YdiU family protein, at 988,072 to 989,505
_RS06510
Position (kb) 986
987
988 Strain fitness (log2 ratio) -1
0
1 at 985.573 kb on + strand, within SGL_RS06490 at 985.750 kb on + strand, within SGL_RS06490 at 986.033 kb on - strand, within SGL_RS06490 at 986.110 kb on + strand, within SGL_RS06490 at 986.490 kb on + strand at 986.525 kb on + strand at 986.558 kb on + strand at 986.730 kb on - strand, within SGL_RS06500 at 986.787 kb on - strand, within SGL_RS06500 at 986.787 kb on - strand, within SGL_RS06500 at 987.559 kb on + strand, within SGL_RS06500 at 987.647 kb on - strand at 988.180 kb on - strand at 988.381 kb on + strand, within SGL_RS06510 at 988.448 kb on - strand, within SGL_RS06510 at 988.470 kb on + strand, within SGL_RS06510 at 988.490 kb on - strand, within SGL_RS06510 at 988.698 kb on - strand, within SGL_RS06510 at 988.704 kb on + strand, within SGL_RS06510
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 985,573 + SGL_RS06490 0.35 -0.3 985,750 + SGL_RS06490 0.53 -1.2 986,033 - SGL_RS06490 0.81 -0.5 986,110 + SGL_RS06490 0.89 +0.4 986,490 + +0.7 986,525 + +0.1 986,558 + +0.0 986,730 - SGL_RS06500 0.19 +1.0 986,787 - SGL_RS06500 0.24 +0.4 986,787 - SGL_RS06500 0.24 -0.2 987,559 + SGL_RS06500 0.86 +0.5 987,647 - -0.1 988,180 - +0.3 988,381 + SGL_RS06510 0.22 -0.0 988,448 - SGL_RS06510 0.26 +0.3 988,470 + SGL_RS06510 0.28 -0.2 988,490 - SGL_RS06510 0.29 +0.0 988,698 - SGL_RS06510 0.44 -0.1 988,704 + SGL_RS06510 0.44 +0.5
Or see this region's nucleotide sequence