Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04345 and SGL_RS04350 overlap by 4 nucleotides SGL_RS04350 and SGL_RS04355 overlap by 4 nucleotides SGL_RS04355 and SGL_RS04360 are separated by 267 nucleotides
SGL_RS04345: SGL_RS04345 - response regulator, at 533,113 to 537,474
_RS04345
SGL_RS04350: SGL_RS04350 - PleD family two-component system response regulator, at 537,471 to 538,418
_RS04350
SGL_RS04355: SGL_RS04355 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 538,415 to 539,020
_RS04355
SGL_RS04360: SGL_RS04360 - 5-formyltetrahydrofolate cyclo-ligase, at 539,288 to 539,854
_RS04360
Position (kb) 537
538
539 Strain fitness (log2 ratio) -1
0
1 at 536.538 kb on + strand, within SGL_RS04345 at 536.548 kb on - strand, within SGL_RS04345 at 536.606 kb on + strand, within SGL_RS04345 at 536.606 kb on + strand, within SGL_RS04345 at 536.614 kb on - strand, within SGL_RS04345 at 536.631 kb on + strand, within SGL_RS04345 at 536.633 kb on - strand, within SGL_RS04345 at 536.639 kb on + strand, within SGL_RS04345 at 536.903 kb on + strand, within SGL_RS04345 at 536.920 kb on + strand, within SGL_RS04345 at 537.023 kb on + strand, within SGL_RS04345 at 537.091 kb on + strand at 537.178 kb on - strand at 537.178 kb on - strand at 537.418 kb on + strand at 537.444 kb on - strand at 537.455 kb on + strand at 537.458 kb on + strand at 537.487 kb on - strand at 537.588 kb on - strand, within SGL_RS04350 at 538.058 kb on + strand, within SGL_RS04350 at 538.087 kb on + strand, within SGL_RS04350 at 538.107 kb on + strand, within SGL_RS04350 at 538.119 kb on + strand, within SGL_RS04350 at 538.120 kb on - strand, within SGL_RS04350 at 538.211 kb on - strand, within SGL_RS04350 at 538.233 kb on + strand, within SGL_RS04350 at 538.249 kb on + strand, within SGL_RS04350 at 538.383 kb on + strand at 538.383 kb on + strand at 538.391 kb on - strand at 538.391 kb on - strand at 538.436 kb on - strand at 538.443 kb on + strand at 538.448 kb on + strand at 538.456 kb on - strand at 538.507 kb on - strand, within SGL_RS04355 at 538.587 kb on - strand, within SGL_RS04355 at 538.608 kb on - strand, within SGL_RS04355 at 538.776 kb on - strand, within SGL_RS04355 at 538.781 kb on - strand, within SGL_RS04355 at 538.802 kb on - strand, within SGL_RS04355 at 538.869 kb on - strand, within SGL_RS04355 at 538.890 kb on + strand, within SGL_RS04355 at 538.961 kb on + strand at 538.970 kb on - strand at 539.061 kb on - strand at 539.120 kb on - strand at 539.215 kb on + strand at 539.348 kb on - strand, within SGL_RS04360
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 536,538 + SGL_RS04345 0.79 -0.2 536,548 - SGL_RS04345 0.79 +0.3 536,606 + SGL_RS04345 0.80 +0.3 536,606 + SGL_RS04345 0.80 +0.3 536,614 - SGL_RS04345 0.80 +0.5 536,631 + SGL_RS04345 0.81 +0.1 536,633 - SGL_RS04345 0.81 -0.2 536,639 + SGL_RS04345 0.81 +0.3 536,903 + SGL_RS04345 0.87 +0.2 536,920 + SGL_RS04345 0.87 -0.2 537,023 + SGL_RS04345 0.90 +0.9 537,091 + +0.2 537,178 - +0.6 537,178 - -0.5 537,418 + +0.2 537,444 - +1.0 537,455 + +0.3 537,458 + -0.0 537,487 - +0.3 537,588 - SGL_RS04350 0.12 -0.1 538,058 + SGL_RS04350 0.62 +0.2 538,087 + SGL_RS04350 0.65 +0.5 538,107 + SGL_RS04350 0.67 +0.5 538,119 + SGL_RS04350 0.68 +0.0 538,120 - SGL_RS04350 0.68 +0.4 538,211 - SGL_RS04350 0.78 +0.5 538,233 + SGL_RS04350 0.80 +0.1 538,249 + SGL_RS04350 0.82 +0.3 538,383 + +0.1 538,383 + +0.4 538,391 - +0.7 538,391 - -0.1 538,436 - +0.3 538,443 + -0.5 538,448 + +0.7 538,456 - +1.5 538,507 - SGL_RS04355 0.15 +0.1 538,587 - SGL_RS04355 0.28 +0.1 538,608 - SGL_RS04355 0.32 +0.5 538,776 - SGL_RS04355 0.60 +0.3 538,781 - SGL_RS04355 0.60 +0.4 538,802 - SGL_RS04355 0.64 +0.9 538,869 - SGL_RS04355 0.75 -0.3 538,890 + SGL_RS04355 0.78 +0.4 538,961 + +0.1 538,970 - +0.1 539,061 - +0.4 539,120 - +0.3 539,215 + +0.1 539,348 - SGL_RS04360 0.11 +0.4
Or see this region's nucleotide sequence