Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03975 and SGL_RS03980 are separated by 181 nucleotides SGL_RS03980 and SGL_RS03985 are separated by 50 nucleotides SGL_RS03985 and SGL_RS03990 are separated by 55 nucleotides SGL_RS03990 and SGL_RS03995 are separated by 136 nucleotides
SGL_RS03975: SGL_RS03975 - BtpA/SgcQ family protein, at 445,061 to 445,924
_RS03975
SGL_RS03980: SGL_RS03980 - tRNA-Arg, at 446,106 to 446,179
_RS03980
SGL_RS03985: SGL_RS03985 - hypothetical protein, at 446,230 to 446,751
_RS03985
SGL_RS03990: SGL_RS03990 - hypothetical protein, at 446,807 to 447,694
_RS03990
SGL_RS03995: SGL_RS03995 - FAD-dependent oxidoreductase, at 447,831 to 448,979
_RS03995
Position (kb) 446
447
448 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 445.968 kb on - strand at 445.978 kb on - strand at 446.049 kb on - strand at 446.065 kb on + strand at 446.073 kb on - strand at 446.280 kb on + strand at 446.285 kb on + strand, within SGL_RS03985 at 446.502 kb on - strand, within SGL_RS03985 at 446.582 kb on - strand, within SGL_RS03985 at 446.612 kb on - strand, within SGL_RS03985 at 446.646 kb on + strand, within SGL_RS03985 at 446.654 kb on - strand, within SGL_RS03985 at 446.680 kb on + strand, within SGL_RS03985 at 446.927 kb on - strand, within SGL_RS03990 at 447.013 kb on + strand, within SGL_RS03990 at 447.013 kb on + strand, within SGL_RS03990 at 447.053 kb on + strand, within SGL_RS03990 at 447.176 kb on - strand, within SGL_RS03990 at 447.269 kb on + strand, within SGL_RS03990 at 447.283 kb on + strand, within SGL_RS03990 at 447.400 kb on + strand, within SGL_RS03990 at 447.488 kb on + strand, within SGL_RS03990 at 447.543 kb on - strand, within SGL_RS03990 at 447.663 kb on + strand at 447.731 kb on - strand at 447.731 kb on - strand at 447.731 kb on - strand at 447.792 kb on + strand at 447.861 kb on + strand at 447.902 kb on + strand at 448.020 kb on + strand, within SGL_RS03995 at 448.061 kb on - strand, within SGL_RS03995 at 448.244 kb on - strand, within SGL_RS03995 at 448.291 kb on + strand, within SGL_RS03995 at 448.408 kb on - strand, within SGL_RS03995 at 448.527 kb on + strand, within SGL_RS03995 at 448.537 kb on + strand, within SGL_RS03995 at 448.608 kb on + strand, within SGL_RS03995 at 448.635 kb on + strand, within SGL_RS03995
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 445,968 - -2.8 445,978 - -0.3 446,049 - -0.3 446,065 + +0.9 446,073 - +0.5 446,280 + -0.1 446,285 + SGL_RS03985 0.11 -0.4 446,502 - SGL_RS03985 0.52 -0.1 446,582 - SGL_RS03985 0.67 +0.3 446,612 - SGL_RS03985 0.73 -0.1 446,646 + SGL_RS03985 0.80 +0.0 446,654 - SGL_RS03985 0.81 +0.3 446,680 + SGL_RS03985 0.86 +0.1 446,927 - SGL_RS03990 0.14 +0.1 447,013 + SGL_RS03990 0.23 +0.5 447,013 + SGL_RS03990 0.23 +0.6 447,053 + SGL_RS03990 0.28 +0.3 447,176 - SGL_RS03990 0.42 +0.2 447,269 + SGL_RS03990 0.52 -0.1 447,283 + SGL_RS03990 0.54 +0.3 447,400 + SGL_RS03990 0.67 +0.1 447,488 + SGL_RS03990 0.77 +0.3 447,543 - SGL_RS03990 0.83 +0.9 447,663 + -0.0 447,731 - -0.1 447,731 - +0.2 447,731 - +0.1 447,792 + -0.1 447,861 + +0.1 447,902 + +0.3 448,020 + SGL_RS03995 0.16 -0.0 448,061 - SGL_RS03995 0.20 +0.3 448,244 - SGL_RS03995 0.36 +0.4 448,291 + SGL_RS03995 0.40 +0.1 448,408 - SGL_RS03995 0.50 -0.1 448,527 + SGL_RS03995 0.61 +0.1 448,537 + SGL_RS03995 0.61 -0.1 448,608 + SGL_RS03995 0.68 -0.4 448,635 + SGL_RS03995 0.70 +0.4
Or see this region's nucleotide sequence