Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03815 and SGL_RS03820 are separated by 119 nucleotides SGL_RS03820 and SGL_RS03825 are separated by 117 nucleotides
SGL_RS03815: SGL_RS03815 - hybrid sensor histidine kinase/response regulator, at 402,290 to 403,432
_RS03815
SGL_RS03820: SGL_RS03820 - universal stress protein, at 403,552 to 404,427
_RS03820
SGL_RS03825: SGL_RS03825 - ExeM/NucH family extracellular endonuclease, at 404,545 to 410,184
_RS03825
Position (kb) 403
404
405 Strain fitness (log2 ratio) -1
0
1 at 402.644 kb on + strand, within SGL_RS03815 at 402.752 kb on - strand, within SGL_RS03815 at 402.826 kb on + strand, within SGL_RS03815 at 402.826 kb on + strand, within SGL_RS03815 at 402.882 kb on + strand, within SGL_RS03815 at 402.928 kb on - strand, within SGL_RS03815 at 402.937 kb on + strand, within SGL_RS03815 at 402.947 kb on + strand, within SGL_RS03815 at 402.955 kb on - strand, within SGL_RS03815 at 403.155 kb on + strand, within SGL_RS03815 at 403.171 kb on - strand, within SGL_RS03815 at 403.219 kb on + strand, within SGL_RS03815 at 403.220 kb on - strand, within SGL_RS03815 at 403.222 kb on + strand, within SGL_RS03815 at 403.247 kb on - strand, within SGL_RS03815 at 403.289 kb on + strand, within SGL_RS03815 at 403.310 kb on + strand, within SGL_RS03815 at 403.310 kb on + strand, within SGL_RS03815 at 403.318 kb on - strand at 403.324 kb on + strand at 403.324 kb on + strand at 403.332 kb on - strand at 403.402 kb on - strand at 403.407 kb on + strand at 403.466 kb on - strand at 403.689 kb on - strand, within SGL_RS03820 at 403.758 kb on - strand, within SGL_RS03820 at 403.778 kb on + strand, within SGL_RS03820 at 403.785 kb on + strand, within SGL_RS03820 at 403.786 kb on - strand, within SGL_RS03820 at 403.809 kb on - strand, within SGL_RS03820 at 403.906 kb on + strand, within SGL_RS03820 at 403.955 kb on + strand, within SGL_RS03820 at 403.976 kb on - strand, within SGL_RS03820 at 403.978 kb on - strand, within SGL_RS03820 at 404.143 kb on + strand, within SGL_RS03820 at 404.153 kb on + strand, within SGL_RS03820 at 404.153 kb on + strand, within SGL_RS03820 at 404.161 kb on - strand, within SGL_RS03820 at 404.267 kb on - strand, within SGL_RS03820 at 404.274 kb on - strand, within SGL_RS03820 at 404.362 kb on + strand at 404.431 kb on + strand at 404.555 kb on + strand at 404.653 kb on - strand at 404.715 kb on - strand at 404.796 kb on - strand at 404.796 kb on - strand at 404.870 kb on - strand at 404.875 kb on - strand at 405.222 kb on + strand, within SGL_RS03825 at 405.230 kb on - strand, within SGL_RS03825 at 405.230 kb on - strand, within SGL_RS03825 at 405.308 kb on + strand, within SGL_RS03825 at 405.399 kb on - strand, within SGL_RS03825 at 405.405 kb on - strand, within SGL_RS03825 at 405.418 kb on - strand, within SGL_RS03825
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 402,644 + SGL_RS03815 0.31 +0.1 402,752 - SGL_RS03815 0.40 +0.2 402,826 + SGL_RS03815 0.47 +0.1 402,826 + SGL_RS03815 0.47 +0.0 402,882 + SGL_RS03815 0.52 -0.4 402,928 - SGL_RS03815 0.56 -0.6 402,937 + SGL_RS03815 0.57 +0.1 402,947 + SGL_RS03815 0.57 -0.0 402,955 - SGL_RS03815 0.58 -0.1 403,155 + SGL_RS03815 0.76 -0.2 403,171 - SGL_RS03815 0.77 -0.1 403,219 + SGL_RS03815 0.81 -0.4 403,220 - SGL_RS03815 0.81 -0.3 403,222 + SGL_RS03815 0.82 -0.0 403,247 - SGL_RS03815 0.84 -0.1 403,289 + SGL_RS03815 0.87 +0.2 403,310 + SGL_RS03815 0.89 +0.1 403,310 + SGL_RS03815 0.89 +0.9 403,318 - +0.1 403,324 + +0.4 403,324 + -0.3 403,332 - +0.1 403,402 - -0.1 403,407 + -0.0 403,466 - +0.5 403,689 - SGL_RS03820 0.16 -0.1 403,758 - SGL_RS03820 0.24 +0.4 403,778 + SGL_RS03820 0.26 +0.1 403,785 + SGL_RS03820 0.27 +0.0 403,786 - SGL_RS03820 0.27 +0.2 403,809 - SGL_RS03820 0.29 +0.3 403,906 + SGL_RS03820 0.40 +0.5 403,955 + SGL_RS03820 0.46 +0.5 403,976 - SGL_RS03820 0.48 -0.1 403,978 - SGL_RS03820 0.49 +0.7 404,143 + SGL_RS03820 0.67 +0.2 404,153 + SGL_RS03820 0.69 +0.5 404,153 + SGL_RS03820 0.69 +0.9 404,161 - SGL_RS03820 0.70 +0.3 404,267 - SGL_RS03820 0.82 -0.1 404,274 - SGL_RS03820 0.82 -0.2 404,362 + +0.1 404,431 + -0.9 404,555 + +1.2 404,653 - +0.1 404,715 - +0.2 404,796 - +0.1 404,796 - +0.3 404,870 - -0.3 404,875 - +0.0 405,222 + SGL_RS03825 0.12 +0.3 405,230 - SGL_RS03825 0.12 -0.8 405,230 - SGL_RS03825 0.12 -0.2 405,308 + SGL_RS03825 0.14 +0.8 405,399 - SGL_RS03825 0.15 -1.1 405,405 - SGL_RS03825 0.15 +0.6 405,418 - SGL_RS03825 0.15 +0.5
Or see this region's nucleotide sequence