Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02760 and SGL_RS02765 are separated by 79 nucleotides SGL_RS02765 and SGL_RS02770 overlap by 4 nucleotides SGL_RS02770 and SGL_RS19750 are separated by 37 nucleotides SGL_RS19750 and SGL_RS02775 are separated by 90 nucleotides
SGL_RS02760: SGL_RS02760 - tRNA-Pro, at 189,880 to 189,953
_RS02760
SGL_RS02765: SGL_RS02765 - DUF429 domain-containing protein, at 190,033 to 190,818
_RS02765
SGL_RS02770: SGL_RS02770 - alpha-E domain-containing protein, at 190,815 to 191,819
_RS02770
SGL_RS19750: SGL_RS19750 - hypothetical protein, at 191,857 to 192,045
_RS19750
SGL_RS02775: SGL_RS02775 - Uma2 family endonuclease, at 192,136 to 192,783
_RS02775
Position (kb) 190
191
192 Strain fitness (log2 ratio) -1
0
1 at 190.051 kb on + strand at 190.186 kb on + strand, within SGL_RS02765 at 190.186 kb on + strand, within SGL_RS02765 at 190.588 kb on - strand, within SGL_RS02765 at 190.604 kb on - strand, within SGL_RS02765 at 190.606 kb on - strand, within SGL_RS02765 at 190.671 kb on - strand, within SGL_RS02765 at 190.855 kb on - strand at 190.878 kb on - strand at 191.016 kb on - strand, within SGL_RS02770 at 191.173 kb on - strand, within SGL_RS02770 at 191.173 kb on - strand, within SGL_RS02770 at 191.220 kb on - strand, within SGL_RS02770 at 191.230 kb on - strand, within SGL_RS02770 at 191.246 kb on + strand, within SGL_RS02770 at 191.249 kb on - strand, within SGL_RS02770 at 191.399 kb on + strand, within SGL_RS02770 at 191.475 kb on - strand, within SGL_RS02770 at 191.575 kb on + strand, within SGL_RS02770 at 191.589 kb on - strand, within SGL_RS02770 at 191.635 kb on + strand, within SGL_RS02770 at 191.712 kb on - strand, within SGL_RS02770 at 191.781 kb on - strand at 191.862 kb on - strand at 191.884 kb on - strand, within SGL_RS19750 at 192.009 kb on - strand, within SGL_RS19750 at 192.048 kb on - strand at 192.360 kb on + strand, within SGL_RS02775 at 192.360 kb on + strand, within SGL_RS02775 at 192.360 kb on + strand, within SGL_RS02775 at 192.360 kb on + strand, within SGL_RS02775 at 192.360 kb on + strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.368 kb on - strand, within SGL_RS02775 at 192.637 kb on - strand, within SGL_RS02775 at 192.637 kb on - strand, within SGL_RS02775
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 190,051 + +0.0 190,186 + SGL_RS02765 0.19 -0.4 190,186 + SGL_RS02765 0.19 -0.0 190,588 - SGL_RS02765 0.71 +0.3 190,604 - SGL_RS02765 0.73 +0.6 190,606 - SGL_RS02765 0.73 -0.2 190,671 - SGL_RS02765 0.81 -0.2 190,855 - -0.1 190,878 - -0.1 191,016 - SGL_RS02770 0.20 +0.2 191,173 - SGL_RS02770 0.36 +0.3 191,173 - SGL_RS02770 0.36 +0.5 191,220 - SGL_RS02770 0.40 +0.5 191,230 - SGL_RS02770 0.41 +0.3 191,246 + SGL_RS02770 0.43 +0.2 191,249 - SGL_RS02770 0.43 -0.2 191,399 + SGL_RS02770 0.58 +0.5 191,475 - SGL_RS02770 0.66 +0.3 191,575 + SGL_RS02770 0.76 +0.3 191,589 - SGL_RS02770 0.77 +0.0 191,635 + SGL_RS02770 0.82 +0.5 191,712 - SGL_RS02770 0.89 -0.3 191,781 - +0.0 191,862 - +0.2 191,884 - SGL_RS19750 0.14 +0.2 192,009 - SGL_RS19750 0.80 +0.1 192,048 - +0.6 192,360 + SGL_RS02775 0.35 +0.0 192,360 + SGL_RS02775 0.35 -0.1 192,360 + SGL_RS02775 0.35 -0.4 192,360 + SGL_RS02775 0.35 +0.2 192,360 + SGL_RS02775 0.35 -0.3 192,368 - SGL_RS02775 0.36 -0.4 192,368 - SGL_RS02775 0.36 +0.2 192,368 - SGL_RS02775 0.36 +0.1 192,368 - SGL_RS02775 0.36 +0.5 192,368 - SGL_RS02775 0.36 -0.4 192,368 - SGL_RS02775 0.36 +1.0 192,368 - SGL_RS02775 0.36 -0.1 192,637 - SGL_RS02775 0.77 +0.3 192,637 - SGL_RS02775 0.77 +0.0
Or see this region's nucleotide sequence