Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS01230 and SGL_RS01235 are separated by 119 nucleotides SGL_RS01235 and SGL_RS01240 are separated by 44 nucleotides SGL_RS01240 and SGL_RS01245 are separated by 246 nucleotides
SGL_RS01230: SGL_RS01230 - Crp/Fnr family transcriptional regulator, at 17,687 to 18,409
_RS01230
SGL_RS01235: SGL_RS01235 - class I SAM-dependent methyltransferase, at 18,529 to 19,311
_RS01235
SGL_RS01240: SGL_RS01240 - cupin domain-containing protein, at 19,356 to 19,691
_RS01240
SGL_RS01245: SGL_RS01245 - carboxylesterase family protein, at 19,938 to 21,278
_RS01245
Position (kb) 19
20 Strain fitness (log2 ratio) -1
0
1
2 at 18.416 kb on + strand at 18.424 kb on - strand at 18.432 kb on - strand at 18.453 kb on - strand at 18.497 kb on - strand at 18.548 kb on + strand at 18.568 kb on + strand at 18.728 kb on + strand, within SGL_RS01235 at 18.806 kb on + strand, within SGL_RS01235 at 18.849 kb on + strand, within SGL_RS01235 at 18.936 kb on + strand, within SGL_RS01235 at 18.962 kb on + strand, within SGL_RS01235 at 19.021 kb on + strand, within SGL_RS01235 at 19.031 kb on + strand, within SGL_RS01235 at 19.046 kb on + strand, within SGL_RS01235 at 19.054 kb on - strand, within SGL_RS01235 at 19.076 kb on - strand, within SGL_RS01235 at 19.113 kb on + strand, within SGL_RS01235 at 19.125 kb on + strand, within SGL_RS01235 at 19.145 kb on - strand, within SGL_RS01235 at 19.170 kb on + strand, within SGL_RS01235 at 19.271 kb on + strand at 19.288 kb on - strand at 19.404 kb on - strand, within SGL_RS01240 at 19.439 kb on - strand, within SGL_RS01240 at 19.535 kb on + strand, within SGL_RS01240 at 19.543 kb on + strand, within SGL_RS01240 at 19.543 kb on + strand, within SGL_RS01240 at 19.594 kb on + strand, within SGL_RS01240 at 19.728 kb on + strand at 19.736 kb on - strand at 19.747 kb on + strand at 19.749 kb on - strand at 19.985 kb on - strand at 20.042 kb on + strand at 20.068 kb on - strand at 20.138 kb on + strand, within SGL_RS01245 at 20.228 kb on - strand, within SGL_RS01245 at 20.270 kb on + strand, within SGL_RS01245 at 20.438 kb on + strand, within SGL_RS01245 at 20.459 kb on + strand, within SGL_RS01245 at 20.459 kb on + strand, within SGL_RS01245 at 20.508 kb on + strand, within SGL_RS01245 at 20.508 kb on + strand, within SGL_RS01245 at 20.547 kb on + strand, within SGL_RS01245 at 20.607 kb on + strand, within SGL_RS01245 at 20.610 kb on + strand, within SGL_RS01245 at 20.615 kb on + strand, within SGL_RS01245 at 20.623 kb on - strand, within SGL_RS01245 at 20.636 kb on + strand, within SGL_RS01245 at 20.652 kb on - strand, within SGL_RS01245 at 20.654 kb on + strand, within SGL_RS01245 at 20.654 kb on + strand, within SGL_RS01245 at 20.657 kb on - strand, within SGL_RS01245 at 20.659 kb on + strand, within SGL_RS01245 at 20.683 kb on - strand, within SGL_RS01245
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 18,416 + +0.9 18,424 - -0.6 18,432 - +0.2 18,453 - +0.6 18,497 - +0.8 18,548 + -0.5 18,568 + -0.1 18,728 + SGL_RS01235 0.25 -0.0 18,806 + SGL_RS01235 0.35 +0.7 18,849 + SGL_RS01235 0.41 +0.5 18,936 + SGL_RS01235 0.52 -0.0 18,962 + SGL_RS01235 0.55 +0.4 19,021 + SGL_RS01235 0.63 -0.0 19,031 + SGL_RS01235 0.64 +0.3 19,046 + SGL_RS01235 0.66 -1.1 19,054 - SGL_RS01235 0.67 -0.1 19,076 - SGL_RS01235 0.70 +0.3 19,113 + SGL_RS01235 0.75 -0.1 19,125 + SGL_RS01235 0.76 -1.4 19,145 - SGL_RS01235 0.79 +0.9 19,170 + SGL_RS01235 0.82 +0.5 19,271 + +0.7 19,288 - +0.2 19,404 - SGL_RS01240 0.14 +0.6 19,439 - SGL_RS01240 0.25 +1.3 19,535 + SGL_RS01240 0.53 -0.8 19,543 + SGL_RS01240 0.56 +0.4 19,543 + SGL_RS01240 0.56 +0.4 19,594 + SGL_RS01240 0.71 -0.4 19,728 + -0.1 19,736 - +1.9 19,747 + +0.2 19,749 - +0.6 19,985 - +0.9 20,042 + -0.0 20,068 - +1.4 20,138 + SGL_RS01245 0.15 +0.2 20,228 - SGL_RS01245 0.22 +0.2 20,270 + SGL_RS01245 0.25 +0.7 20,438 + SGL_RS01245 0.37 -0.5 20,459 + SGL_RS01245 0.39 +0.1 20,459 + SGL_RS01245 0.39 -0.1 20,508 + SGL_RS01245 0.43 -0.1 20,508 + SGL_RS01245 0.43 -0.0 20,547 + SGL_RS01245 0.45 +0.2 20,607 + SGL_RS01245 0.50 -0.1 20,610 + SGL_RS01245 0.50 +1.8 20,615 + SGL_RS01245 0.50 +1.8 20,623 - SGL_RS01245 0.51 -1.1 20,636 + SGL_RS01245 0.52 +0.2 20,652 - SGL_RS01245 0.53 -0.4 20,654 + SGL_RS01245 0.53 +1.2 20,654 + SGL_RS01245 0.53 -0.8 20,657 - SGL_RS01245 0.54 -0.0 20,659 + SGL_RS01245 0.54 -1.1 20,683 - SGL_RS01245 0.56 +0.4
Or see this region's nucleotide sequence