Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS00725

Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS00720 and SGL_RS00725 are separated by 47 nucleotidesSGL_RS00725 and SGL_RS00730 are separated by 22 nucleotidesSGL_RS00730 and SGL_RS00735 are separated by 38 nucleotides SGL_RS00720: SGL_RS00720 - DUF262 domain-containing protein, at 22,328 to 24,058 _RS00720 SGL_RS00725: SGL_RS00725 - hypothetical protein, at 24,106 to 24,495 _RS00725 SGL_RS00730: SGL_RS00730 - hypothetical protein, at 24,518 to 24,886 _RS00730 SGL_RS00735: SGL_RS00735 - hypothetical protein, at 24,925 to 25,509 _RS00735 Position (kb) 24 25Strain fitness (log2 ratio) -1 0 1at 24.201 kb on + strand, within SGL_RS00725at 24.429 kb on - strand, within SGL_RS00725at 24.989 kb on - strand, within SGL_RS00735at 25.024 kb on + strand, within SGL_RS00735at 25.032 kb on - strand, within SGL_RS00735at 25.032 kb on - strand, within SGL_RS00735at 25.057 kb on + strand, within SGL_RS00735at 25.165 kb on + strand, within SGL_RS00735at 25.184 kb on + strand, within SGL_RS00735at 25.192 kb on + strand, within SGL_RS00735at 25.241 kb on + strand, within SGL_RS00735at 25.243 kb on + strand, within SGL_RS00735at 25.256 kb on - strand, within SGL_RS00735

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
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24,201 + SGL_RS00725 0.24 -0.1
24,429 - SGL_RS00725 0.83 +0.9
24,989 - SGL_RS00735 0.11 +0.0
25,024 + SGL_RS00735 0.17 +0.7
25,032 - SGL_RS00735 0.18 +0.6
25,032 - SGL_RS00735 0.18 -0.5
25,057 + SGL_RS00735 0.23 -0.3
25,165 + SGL_RS00735 0.41 +0.2
25,184 + SGL_RS00735 0.44 +0.5
25,192 + SGL_RS00735 0.46 +0.4
25,241 + SGL_RS00735 0.54 -0.1
25,243 + SGL_RS00735 0.54 -0.5
25,256 - SGL_RS00735 0.57 -0.7

Or see this region's nucleotide sequence