Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS00595

Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS00585 and SGL_RS00590 are separated by 56 nucleotidesSGL_RS00590 and SGL_RS00595 are separated by 489 nucleotidesSGL_RS00595 and SGL_RS00600 are separated by 90 nucleotides SGL_RS00585: SGL_RS00585 - Rpn family recombination-promoting nuclease/putative transposase, at 112,352 to 113,182 _RS00585 SGL_RS00590: SGL_RS00590 - hypothetical protein, at 113,239 to 113,463 _RS00590 SGL_RS00595: SGL_RS00595 - hypothetical protein, at 113,953 to 114,423 _RS00595 SGL_RS00600: SGL_RS00600 - hypothetical protein, at 114,514 to 115,284 _RS00600 Position (kb) 113 114 115Strain fitness (log2 ratio) -1 0 1at 113.473 kb on + strandat 113.506 kb on + strandat 113.699 kb on + strandat 113.853 kb on + strandat 113.924 kb on - strandat 114.143 kb on - strand, within SGL_RS00595at 114.692 kb on - strand, within SGL_RS00600at 115.255 kb on + strandat 115.366 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
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113,473 + -0.3
113,506 + +0.0
113,699 + +0.1
113,853 + -0.4
113,924 - +0.0
114,143 - SGL_RS00595 0.40 +0.4
114,692 - SGL_RS00600 0.23 -0.5
115,255 + -0.4
115,366 + -0.1

Or see this region's nucleotide sequence