Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12150

Experiment: growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS12145 and SGL_RS12150 are separated by 71 nucleotidesSGL_RS12150 and SGL_RS12155 are separated by 85 nucleotides SGL_RS12145: SGL_RS12145 - serine/threonine-protein kinase, at 2,182,096 to 2,183,958 _RS12145 SGL_RS12150: SGL_RS12150 - hypothetical protein, at 2,184,030 to 2,185,784 _RS12150 SGL_RS12155: SGL_RS12155 - caspase family protein, at 2,185,870 to 2,188,077 _RS12155 Position (kb) 2184 2185 2186Strain fitness (log2 ratio) -1 0 1at 2183.065 kb on - strand, within SGL_RS12145at 2183.081 kb on + strand, within SGL_RS12145at 2183.088 kb on - strand, within SGL_RS12145at 2183.133 kb on - strand, within SGL_RS12145at 2183.170 kb on - strand, within SGL_RS12145at 2183.303 kb on + strand, within SGL_RS12145at 2183.357 kb on - strand, within SGL_RS12145at 2183.401 kb on + strand, within SGL_RS12145at 2183.401 kb on + strand, within SGL_RS12145at 2183.409 kb on - strand, within SGL_RS12145at 2183.479 kb on + strand, within SGL_RS12145at 2183.620 kb on + strand, within SGL_RS12145at 2183.871 kb on - strandat 2183.877 kb on - strandat 2183.966 kb on + strandat 2183.968 kb on + strandat 2184.036 kb on + strandat 2184.081 kb on + strandat 2184.089 kb on - strandat 2184.114 kb on + strandat 2184.122 kb on - strandat 2184.149 kb on - strandat 2184.150 kb on - strandat 2184.190 kb on + strandat 2184.346 kb on + strand, within SGL_RS12150at 2184.444 kb on - strand, within SGL_RS12150at 2184.815 kb on + strand, within SGL_RS12150at 2184.929 kb on + strand, within SGL_RS12150at 2185.017 kb on - strand, within SGL_RS12150at 2185.104 kb on + strand, within SGL_RS12150at 2185.112 kb on - strand, within SGL_RS12150at 2185.198 kb on + strand, within SGL_RS12150at 2185.268 kb on + strand, within SGL_RS12150at 2185.508 kb on + strand, within SGL_RS12150at 2185.516 kb on - strand, within SGL_RS12150at 2185.521 kb on - strand, within SGL_RS12150at 2185.598 kb on - strand, within SGL_RS12150at 2185.617 kb on - strandat 2185.685 kb on - strandat 2185.756 kb on - strandat 2185.756 kb on - strandat 2185.761 kb on + strandat 2185.810 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
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2,183,065 - SGL_RS12145 0.52 +0.5
2,183,081 + SGL_RS12145 0.53 +0.6
2,183,088 - SGL_RS12145 0.53 +0.0
2,183,133 - SGL_RS12145 0.56 +0.2
2,183,170 - SGL_RS12145 0.58 +0.3
2,183,303 + SGL_RS12145 0.65 -0.3
2,183,357 - SGL_RS12145 0.68 +0.0
2,183,401 + SGL_RS12145 0.70 +0.9
2,183,401 + SGL_RS12145 0.70 +0.3
2,183,409 - SGL_RS12145 0.70 +0.4
2,183,479 + SGL_RS12145 0.74 -0.5
2,183,620 + SGL_RS12145 0.82 +0.1
2,183,871 - -0.6
2,183,877 - -0.1
2,183,966 + -0.7
2,183,968 + +0.1
2,184,036 + +0.3
2,184,081 + +0.5
2,184,089 - +0.6
2,184,114 + +0.9
2,184,122 - +1.0
2,184,149 - +0.9
2,184,150 - +1.4
2,184,190 + +0.7
2,184,346 + SGL_RS12150 0.18 +0.5
2,184,444 - SGL_RS12150 0.24 +0.4
2,184,815 + SGL_RS12150 0.45 +0.5
2,184,929 + SGL_RS12150 0.51 +0.7
2,185,017 - SGL_RS12150 0.56 +0.7
2,185,104 + SGL_RS12150 0.61 +1.1
2,185,112 - SGL_RS12150 0.62 +0.9
2,185,198 + SGL_RS12150 0.67 +0.6
2,185,268 + SGL_RS12150 0.71 +0.7
2,185,508 + SGL_RS12150 0.84 +1.2
2,185,516 - SGL_RS12150 0.85 +0.4
2,185,521 - SGL_RS12150 0.85 +0.8
2,185,598 - SGL_RS12150 0.89 +1.2
2,185,617 - +0.8
2,185,685 - +1.5
2,185,756 - +1.4
2,185,756 - +0.5
2,185,761 + +0.8
2,185,810 + +0.8

Or see this region's nucleotide sequence