Experiment: growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11200 and SGL_RS11205 are separated by 290 nucleotides SGL_RS11205 and SGL_RS11210 are separated by 93 nucleotides SGL_RS11210 and SGL_RS11215 are separated by 144 nucleotides
SGL_RS11200: SGL_RS11200 - alanine--glyoxylate aminotransferase family protein, at 1,973,611 to 1,974,765
_RS11200
SGL_RS11205: SGL_RS11205 - FHA domain-containing protein, at 1,975,056 to 1,975,481
_RS11205
SGL_RS11210: SGL_RS11210 - 2Fe-2S iron-sulfur cluster-binding protein, at 1,975,575 to 1,975,874
_RS11210
SGL_RS11215: SGL_RS11215 - HEAT repeat domain-containing protein, at 1,976,019 to 1,976,720
_RS11215
Position (kb)
1975
1976 Strain fitness (log2 ratio)
-1
0
1
2 at 1974.896 kb on + strand at 1974.896 kb on + strand at 1974.949 kb on + strand at 1974.992 kb on - strand at 1975.023 kb on - strand at 1975.087 kb on - strand at 1975.104 kb on + strand, within SGL_RS11205 at 1975.112 kb on - strand, within SGL_RS11205 at 1975.311 kb on + strand, within SGL_RS11205 at 1975.319 kb on - strand, within SGL_RS11205 at 1975.319 kb on - strand, within SGL_RS11205 at 1975.319 kb on - strand, within SGL_RS11205 at 1975.394 kb on + strand, within SGL_RS11205 at 1975.455 kb on - strand at 1975.478 kb on - strand at 1975.537 kb on - strand at 1975.572 kb on + strand at 1975.580 kb on - strand at 1975.587 kb on - strand at 1975.713 kb on + strand, within SGL_RS11210 at 1975.825 kb on - strand, within SGL_RS11210 at 1975.825 kb on - strand, within SGL_RS11210 at 1975.843 kb on - strand, within SGL_RS11210 at 1975.897 kb on - strand at 1976.100 kb on - strand, within SGL_RS11215 at 1976.138 kb on + strand, within SGL_RS11215 at 1976.214 kb on + strand, within SGL_RS11215 at 1976.246 kb on + strand, within SGL_RS11215 at 1976.396 kb on + strand, within SGL_RS11215 at 1976.404 kb on - strand, within SGL_RS11215
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation remove 1,974,896 + -0.7 1,974,896 + -0.2 1,974,949 + +0.2 1,974,992 - -0.3 1,975,023 - -0.6 1,975,087 - +1.0 1,975,104 + SGL_RS11205 0.11 +0.5 1,975,112 - SGL_RS11205 0.13 +0.6 1,975,311 + SGL_RS11205 0.60 +0.7 1,975,319 - SGL_RS11205 0.62 +0.4 1,975,319 - SGL_RS11205 0.62 +1.6 1,975,319 - SGL_RS11205 0.62 +0.7 1,975,394 + SGL_RS11205 0.79 +0.4 1,975,455 - +2.1 1,975,478 - +0.3 1,975,537 - +0.1 1,975,572 + -0.1 1,975,580 - +0.5 1,975,587 - -0.2 1,975,713 + SGL_RS11210 0.46 +0.5 1,975,825 - SGL_RS11210 0.83 -0.2 1,975,825 - SGL_RS11210 0.83 +0.0 1,975,843 - SGL_RS11210 0.89 -0.7 1,975,897 - -0.5 1,976,100 - SGL_RS11215 0.12 +0.3 1,976,138 + SGL_RS11215 0.17 +0.4 1,976,214 + SGL_RS11215 0.28 -0.2 1,976,246 + SGL_RS11215 0.32 -0.2 1,976,396 + SGL_RS11215 0.54 +0.7 1,976,404 - SGL_RS11215 0.55 +0.1
Or see this region's nucleotide sequence