Experiment: growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08135 and SGL_RS08140 are separated by 90 nucleotides SGL_RS08140 and SGL_RS08145 overlap by 1 nucleotides SGL_RS08145 and SGL_RS08150 are separated by 24 nucleotides
SGL_RS08135: SGL_RS08135 - NAD(P)/FAD-dependent oxidoreductase, at 1,337,299 to 1,338,636
_RS08135
SGL_RS08140: SGL_RS08140 - hypothetical protein, at 1,338,727 to 1,339,155
_RS08140
SGL_RS08145: SGL_RS08145 - ribosomal protein S18-alanine N-acetyltransferase, at 1,339,155 to 1,339,631
_RS08145
SGL_RS08150: SGL_RS08150 - deoxyribodipyrimidine photo-lyase, 8-HDF type, at 1,339,656 to 1,341,122
_RS08150
Position (kb)
1339
1340 Strain fitness (log2 ratio)
-1
0
1 at 1338.161 kb on - strand, within SGL_RS08135 at 1338.165 kb on - strand, within SGL_RS08135 at 1338.165 kb on - strand, within SGL_RS08135 at 1338.173 kb on + strand, within SGL_RS08135 at 1338.267 kb on + strand, within SGL_RS08135 at 1338.389 kb on + strand, within SGL_RS08135 at 1338.416 kb on - strand, within SGL_RS08135 at 1338.619 kb on + strand at 1338.762 kb on + strand at 1338.767 kb on - strand at 1338.835 kb on - strand, within SGL_RS08140 at 1338.856 kb on - strand, within SGL_RS08140 at 1338.863 kb on - strand, within SGL_RS08140 at 1338.863 kb on - strand, within SGL_RS08140 at 1338.870 kb on + strand, within SGL_RS08140 at 1338.923 kb on - strand, within SGL_RS08140 at 1338.933 kb on - strand, within SGL_RS08140 at 1339.033 kb on - strand, within SGL_RS08140 at 1339.201 kb on + strand at 1339.406 kb on - strand, within SGL_RS08145 at 1339.453 kb on - strand, within SGL_RS08145 at 1339.513 kb on - strand, within SGL_RS08145 at 1339.591 kb on + strand at 1339.599 kb on - strand at 1339.621 kb on + strand at 1339.834 kb on + strand, within SGL_RS08150 at 1339.958 kb on + strand, within SGL_RS08150 at 1340.106 kb on - strand, within SGL_RS08150 at 1340.122 kb on - strand, within SGL_RS08150 at 1340.129 kb on + strand, within SGL_RS08150 at 1340.215 kb on + strand, within SGL_RS08150 at 1340.317 kb on - strand, within SGL_RS08150 at 1340.319 kb on - strand, within SGL_RS08150 at 1340.501 kb on - strand, within SGL_RS08150 at 1340.585 kb on - strand, within SGL_RS08150
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation remove 1,338,161 - SGL_RS08135 0.64 -0.8 1,338,165 - SGL_RS08135 0.65 -0.0 1,338,165 - SGL_RS08135 0.65 -0.5 1,338,173 + SGL_RS08135 0.65 -0.2 1,338,267 + SGL_RS08135 0.72 +0.0 1,338,389 + SGL_RS08135 0.81 -0.3 1,338,416 - SGL_RS08135 0.83 +0.4 1,338,619 + +0.0 1,338,762 + +1.2 1,338,767 - +0.1 1,338,835 - SGL_RS08140 0.25 -0.1 1,338,856 - SGL_RS08140 0.30 -0.4 1,338,863 - SGL_RS08140 0.32 -0.1 1,338,863 - SGL_RS08140 0.32 -0.2 1,338,870 + SGL_RS08140 0.33 -0.1 1,338,923 - SGL_RS08140 0.46 +0.3 1,338,933 - SGL_RS08140 0.48 +0.3 1,339,033 - SGL_RS08140 0.71 -0.1 1,339,201 + -0.5 1,339,406 - SGL_RS08145 0.53 -1.3 1,339,453 - SGL_RS08145 0.62 -0.1 1,339,513 - SGL_RS08145 0.75 -1.4 1,339,591 + +0.9 1,339,599 - -0.6 1,339,621 + +0.6 1,339,834 + SGL_RS08150 0.12 -0.3 1,339,958 + SGL_RS08150 0.21 +0.4 1,340,106 - SGL_RS08150 0.31 -0.2 1,340,122 - SGL_RS08150 0.32 +0.5 1,340,129 + SGL_RS08150 0.32 -0.3 1,340,215 + SGL_RS08150 0.38 -0.8 1,340,317 - SGL_RS08150 0.45 -0.0 1,340,319 - SGL_RS08150 0.45 -0.4 1,340,501 - SGL_RS08150 0.58 -0.3 1,340,585 - SGL_RS08150 0.63 -0.8
Or see this region's nucleotide sequence