Experiment: growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02965 and SGL_RS02970 are separated by 18 nucleotides SGL_RS02970 and SGL_RS02975 are separated by 58 nucleotides SGL_RS02975 and SGL_RS02980 are separated by 100 nucleotides SGL_RS02980 and SGL_RS02985 are separated by 33 nucleotides
SGL_RS02965: SGL_RS02965 - pyridoxine 5'-phosphate synthase, at 237,600 to 238,325
_RS02965
SGL_RS02970: SGL_RS02970 - DUF2488 family protein, at 238,344 to 238,745
_RS02970
SGL_RS02975: SGL_RS02975 - transglutaminase domain-containing protein, at 238,804 to 240,198
_RS02975
SGL_RS02980: SGL_RS02980 - peptide-methionine (R)-S-oxide reductase MsrB, at 240,299 to 240,829
_RS02980
SGL_RS02985: SGL_RS02985 - HhoA/HhoB/HtrA family serine endopeptidase, at 240,863 to 242,047
_RS02985
Position (kb) 238
239
240
241 Strain fitness (log2 ratio) -1
0
1 at 237.946 kb on + strand, within SGL_RS02965 at 238.162 kb on + strand, within SGL_RS02965 at 238.831 kb on - strand at 238.915 kb on + strand at 238.915 kb on + strand at 238.923 kb on - strand at 239.246 kb on + strand, within SGL_RS02975 at 239.294 kb on - strand, within SGL_RS02975 at 239.367 kb on - strand, within SGL_RS02975 at 239.762 kb on - strand, within SGL_RS02975 at 239.803 kb on + strand, within SGL_RS02975 at 239.942 kb on - strand, within SGL_RS02975 at 240.071 kb on + strand at 240.080 kb on - strand at 240.133 kb on + strand at 240.195 kb on - strand at 240.314 kb on + strand at 240.322 kb on - strand at 240.391 kb on + strand, within SGL_RS02980 at 240.480 kb on + strand, within SGL_RS02980 at 240.632 kb on - strand, within SGL_RS02980 at 240.633 kb on - strand, within SGL_RS02980 at 240.640 kb on - strand, within SGL_RS02980 at 240.677 kb on - strand, within SGL_RS02980 at 240.688 kb on - strand, within SGL_RS02980 at 240.726 kb on + strand, within SGL_RS02980 at 240.850 kb on + strand at 240.929 kb on - strand at 240.929 kb on - strand at 240.985 kb on - strand, within SGL_RS02985 at 240.990 kb on - strand, within SGL_RS02985 at 241.040 kb on - strand, within SGL_RS02985
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation remove 237,946 + SGL_RS02965 0.48 -0.4 238,162 + SGL_RS02965 0.77 -0.4 238,831 - +0.7 238,915 + +1.4 238,915 + +1.1 238,923 - +1.6 239,246 + SGL_RS02975 0.32 +1.0 239,294 - SGL_RS02975 0.35 +1.0 239,367 - SGL_RS02975 0.40 +1.0 239,762 - SGL_RS02975 0.69 +1.2 239,803 + SGL_RS02975 0.72 +1.4 239,942 - SGL_RS02975 0.82 +0.8 240,071 + +0.8 240,080 - +0.8 240,133 + +0.8 240,195 - -0.6 240,314 + +0.8 240,322 - +0.5 240,391 + SGL_RS02980 0.17 +0.9 240,480 + SGL_RS02980 0.34 +0.4 240,632 - SGL_RS02980 0.63 +0.7 240,633 - SGL_RS02980 0.63 +0.3 240,640 - SGL_RS02980 0.64 +0.6 240,677 - SGL_RS02980 0.71 +0.7 240,688 - SGL_RS02980 0.73 +0.9 240,726 + SGL_RS02980 0.80 +0.4 240,850 + +0.7 240,929 - -0.5 240,929 - +0.6 240,985 - SGL_RS02985 0.10 -0.8 240,990 - SGL_RS02985 0.11 -0.2 241,040 - SGL_RS02985 0.15 +0.0
Or see this region's nucleotide sequence