Experiment: growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07590 and SGL_RS07595 are separated by 27 nucleotides SGL_RS07595 and SGL_RS07600 are separated by 304 nucleotides SGL_RS07600 and SGL_RS07605 are separated by 52 nucleotides SGL_RS07605 and SGL_RS07610 are separated by 32 nucleotides
SGL_RS07590: SGL_RS07590 - hydrogenase maturation protease, at 1,227,090 to 1,227,563
_RS07590
SGL_RS07595: SGL_RS07595 - 30S ribosomal protein S6, at 1,227,591 to 1,227,932
_RS07595
SGL_RS07600: SGL_RS07600 - fumarylacetoacetate hydrolase family protein, at 1,228,237 to 1,229,067
_RS07600
SGL_RS07605: SGL_RS07605 - HEAT repeat domain-containing protein, at 1,229,120 to 1,229,938
_RS07605
SGL_RS07610: SGL_RS07610 - cyclophane-forming radical SAM/SPASM peptide maturase GrrM/OscB, at 1,229,971 to 1,231,167
_RS07610
Position (kb) 1228
1229
1230 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1227.240 kb on + strand, within SGL_RS07590 at 1227.243 kb on - strand, within SGL_RS07590 at 1227.261 kb on + strand, within SGL_RS07590 at 1227.320 kb on + strand, within SGL_RS07590 at 1227.407 kb on - strand, within SGL_RS07590 at 1227.434 kb on + strand, within SGL_RS07590 at 1227.450 kb on + strand, within SGL_RS07590 at 1227.509 kb on + strand, within SGL_RS07590 at 1228.134 kb on - strand at 1228.271 kb on - strand at 1228.281 kb on + strand at 1228.359 kb on - strand, within SGL_RS07600 at 1228.366 kb on - strand, within SGL_RS07600 at 1228.649 kb on - strand, within SGL_RS07600 at 1228.876 kb on + strand, within SGL_RS07600 at 1228.883 kb on + strand, within SGL_RS07600 at 1228.925 kb on + strand, within SGL_RS07600 at 1229.017 kb on + strand at 1229.017 kb on + strand at 1229.380 kb on + strand, within SGL_RS07605 at 1229.397 kb on + strand, within SGL_RS07605 at 1229.577 kb on + strand, within SGL_RS07605 at 1229.602 kb on - strand, within SGL_RS07605 at 1229.705 kb on + strand, within SGL_RS07605 at 1229.780 kb on + strand, within SGL_RS07605
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation remove 1,227,240 + SGL_RS07590 0.32 -0.4 1,227,243 - SGL_RS07590 0.32 -0.1 1,227,261 + SGL_RS07590 0.36 +0.3 1,227,320 + SGL_RS07590 0.49 -0.3 1,227,407 - SGL_RS07590 0.67 -0.3 1,227,434 + SGL_RS07590 0.73 -0.3 1,227,450 + SGL_RS07590 0.76 +0.1 1,227,509 + SGL_RS07590 0.88 +0.0 1,228,134 - -0.6 1,228,271 - -1.7 1,228,281 + -0.7 1,228,359 - SGL_RS07600 0.15 -1.1 1,228,366 - SGL_RS07600 0.16 -1.5 1,228,649 - SGL_RS07600 0.50 -2.6 1,228,876 + SGL_RS07600 0.77 -1.2 1,228,883 + SGL_RS07600 0.78 -2.9 1,228,925 + SGL_RS07600 0.83 -0.7 1,229,017 + -1.3 1,229,017 + -1.1 1,229,380 + SGL_RS07605 0.32 -0.6 1,229,397 + SGL_RS07605 0.34 +0.4 1,229,577 + SGL_RS07605 0.56 +1.8 1,229,602 - SGL_RS07605 0.59 +1.6 1,229,705 + SGL_RS07605 0.71 -0.8 1,229,780 + SGL_RS07605 0.81 -0.0
Or see this region's nucleotide sequence