Experiment: growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02375 and SGL_RS02380 are separated by 40 nucleotides SGL_RS02380 and SGL_RS02385 are separated by 175 nucleotides SGL_RS02385 and SGL_RS02390 overlap by 4 nucleotides
SGL_RS02375: SGL_RS02375 - DUF3086 domain-containing protein, at 115,269 to 116,477
_RS02375
SGL_RS02380: SGL_RS02380 - cysteine desulfurase family protein, at 116,518 to 117,693
_RS02380
SGL_RS02385: SGL_RS02385 - phosphate-starvation-inducible PsiE family protein, at 117,869 to 118,336
_RS02385
SGL_RS02390: SGL_RS02390 - NAD(P)/FAD-dependent oxidoreductase, at 118,333 to 119,532
_RS02390
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 115.586 kb on + strand, within SGL_RS02375 at 115.586 kb on + strand, within SGL_RS02375 at 116.035 kb on + strand, within SGL_RS02375 at 116.064 kb on - strand, within SGL_RS02375 at 116.089 kb on + strand, within SGL_RS02375 at 116.148 kb on - strand, within SGL_RS02375 at 116.168 kb on + strand, within SGL_RS02375 at 116.176 kb on - strand, within SGL_RS02375 at 116.279 kb on - strand, within SGL_RS02375 at 116.523 kb on - strand at 116.652 kb on - strand, within SGL_RS02380 at 116.681 kb on - strand, within SGL_RS02380 at 116.794 kb on + strand, within SGL_RS02380 at 116.877 kb on + strand, within SGL_RS02380 at 116.898 kb on - strand, within SGL_RS02380 at 117.015 kb on - strand, within SGL_RS02380 at 117.065 kb on + strand, within SGL_RS02380 at 117.107 kb on - strand, within SGL_RS02380 at 117.130 kb on - strand, within SGL_RS02380 at 117.173 kb on + strand, within SGL_RS02380 at 117.233 kb on - strand, within SGL_RS02380 at 117.319 kb on + strand, within SGL_RS02380 at 117.319 kb on + strand, within SGL_RS02380 at 117.333 kb on + strand, within SGL_RS02380 at 117.385 kb on + strand, within SGL_RS02380 at 117.491 kb on - strand, within SGL_RS02380 at 117.503 kb on - strand, within SGL_RS02380 at 117.513 kb on + strand, within SGL_RS02380 at 117.521 kb on - strand, within SGL_RS02380 at 117.528 kb on + strand, within SGL_RS02380 at 117.559 kb on + strand, within SGL_RS02380 at 117.661 kb on + strand at 117.865 kb on + strand at 118.395 kb on - strand at 118.545 kb on + strand, within SGL_RS02390 at 118.546 kb on - strand, within SGL_RS02390 at 118.570 kb on + strand, within SGL_RS02390 at 118.580 kb on + strand, within SGL_RS02390 at 118.583 kb on - strand, within SGL_RS02390
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation remove 115,586 + SGL_RS02375 0.26 +1.3 115,586 + SGL_RS02375 0.26 +4.5 116,035 + SGL_RS02375 0.63 +1.4 116,064 - SGL_RS02375 0.66 +0.2 116,089 + SGL_RS02375 0.68 +1.5 116,148 - SGL_RS02375 0.73 +1.4 116,168 + SGL_RS02375 0.74 +1.1 116,176 - SGL_RS02375 0.75 +1.3 116,279 - SGL_RS02375 0.84 +1.8 116,523 - +0.3 116,652 - SGL_RS02380 0.11 -2.0 116,681 - SGL_RS02380 0.14 -1.4 116,794 + SGL_RS02380 0.23 -1.1 116,877 + SGL_RS02380 0.31 -1.7 116,898 - SGL_RS02380 0.32 -1.1 117,015 - SGL_RS02380 0.42 -1.7 117,065 + SGL_RS02380 0.47 -0.8 117,107 - SGL_RS02380 0.50 -0.9 117,130 - SGL_RS02380 0.52 -0.2 117,173 + SGL_RS02380 0.56 +0.5 117,233 - SGL_RS02380 0.61 -1.5 117,319 + SGL_RS02380 0.68 -1.6 117,319 + SGL_RS02380 0.68 -2.1 117,333 + SGL_RS02380 0.69 -2.0 117,385 + SGL_RS02380 0.74 -1.6 117,491 - SGL_RS02380 0.83 -1.8 117,503 - SGL_RS02380 0.84 -1.2 117,513 + SGL_RS02380 0.85 -1.7 117,521 - SGL_RS02380 0.85 -0.8 117,528 + SGL_RS02380 0.86 -0.9 117,559 + SGL_RS02380 0.89 +0.5 117,661 + -1.6 117,865 + +0.5 118,395 - +0.2 118,545 + SGL_RS02390 0.18 +0.6 118,546 - SGL_RS02390 0.18 -0.2 118,570 + SGL_RS02390 0.20 +0.7 118,580 + SGL_RS02390 0.21 +0.1 118,583 - SGL_RS02390 0.21 +0.4
Or see this region's nucleotide sequence