Experiment: growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02155 and SGL_RS02160 are separated by 224 nucleotides SGL_RS02160 and SGL_RS02165 are separated by 30 nucleotides SGL_RS02165 and SGL_RS02170 are separated by 26 nucleotides SGL_RS02170 and SGL_RS02175 are separated by 8 nucleotides
SGL_RS02155: SGL_RS02155 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 68,400 to 69,059
_RS02155
SGL_RS02160: SGL_RS02160 - GDSL-type esterase/lipase family protein, at 69,284 to 69,985
_RS02160
SGL_RS02165: SGL_RS02165 - hypothetical protein, at 70,016 to 70,393
_RS02165
SGL_RS02170: SGL_RS02170 - hypothetical protein, at 70,420 to 70,935
_RS02170
SGL_RS02175: SGL_RS02175 - UPF0182 family protein, at 70,944 to 74,042
_RS02175
Position (kb) 70
71 Strain fitness (log2 ratio) -2
-1
0
1 at 69.173 kb on + strand at 69.355 kb on - strand, within SGL_RS02160 at 69.371 kb on + strand, within SGL_RS02160 at 69.452 kb on + strand, within SGL_RS02160 at 69.485 kb on + strand, within SGL_RS02160 at 69.485 kb on + strand, within SGL_RS02160 at 69.493 kb on - strand, within SGL_RS02160 at 69.601 kb on + strand, within SGL_RS02160 at 69.609 kb on - strand, within SGL_RS02160 at 69.656 kb on + strand, within SGL_RS02160 at 69.666 kb on - strand, within SGL_RS02160 at 69.712 kb on - strand, within SGL_RS02160 at 69.735 kb on - strand, within SGL_RS02160 at 69.755 kb on - strand, within SGL_RS02160 at 69.761 kb on + strand, within SGL_RS02160 at 69.930 kb on - strand at 70.167 kb on + strand, within SGL_RS02165 at 70.167 kb on + strand, within SGL_RS02165 at 70.489 kb on - strand, within SGL_RS02170 at 70.774 kb on - strand, within SGL_RS02170 at 71.363 kb on - strand, within SGL_RS02175
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation remove 69,173 + -0.3 69,355 - SGL_RS02160 0.10 -0.4 69,371 + SGL_RS02160 0.12 +0.4 69,452 + SGL_RS02160 0.24 -0.9 69,485 + SGL_RS02160 0.29 -0.4 69,485 + SGL_RS02160 0.29 -0.3 69,493 - SGL_RS02160 0.30 -0.1 69,601 + SGL_RS02160 0.45 -0.0 69,609 - SGL_RS02160 0.46 +1.1 69,656 + SGL_RS02160 0.53 +0.1 69,666 - SGL_RS02160 0.54 +0.2 69,712 - SGL_RS02160 0.61 +0.8 69,735 - SGL_RS02160 0.64 +0.3 69,755 - SGL_RS02160 0.67 -0.4 69,761 + SGL_RS02160 0.68 +0.7 69,930 - +0.5 70,167 + SGL_RS02165 0.40 -1.8 70,167 + SGL_RS02165 0.40 -1.0 70,489 - SGL_RS02170 0.13 +1.3 70,774 - SGL_RS02170 0.69 -0.2 71,363 - SGL_RS02175 0.14 -0.5
Or see this region's nucleotide sequence