Experiment: growth in full media supplemented with 3 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05345 and SGL_RS05350 are separated by 214 nucleotides SGL_RS05350 and SGL_RS05355 overlap by 4 nucleotides SGL_RS05355 and SGL_RS05360 are separated by 111 nucleotides SGL_RS05360 and SGL_RS05365 are separated by 49 nucleotides
SGL_RS05345: SGL_RS05345 - DUF2301 domain-containing membrane protein, at 746,303 to 747,019
_RS05345
SGL_RS05350: SGL_RS05350 - NADH-quinone oxidoreductase subunit K, at 747,234 to 747,578
_RS05350
SGL_RS05355: SGL_RS05355 - cation:proton antiporter, at 747,575 to 749,038
_RS05355
SGL_RS05360: SGL_RS05360 - cation:proton antiporter subunit C, at 749,150 to 749,500
_RS05360
SGL_RS05365: SGL_RS05365 - cation:proton antiporter, at 749,550 to 751,037
_RS05365
Position (kb) 747
748
749
750 Strain fitness (log2 ratio) -1
0
1
2
3 at 746.620 kb on - strand, within SGL_RS05345 at 746.713 kb on + strand, within SGL_RS05345 at 746.733 kb on + strand, within SGL_RS05345 at 746.775 kb on - strand, within SGL_RS05345 at 746.828 kb on + strand, within SGL_RS05345 at 747.050 kb on - strand at 747.175 kb on - strand at 747.235 kb on + strand at 747.394 kb on + strand, within SGL_RS05350 at 747.433 kb on - strand, within SGL_RS05350 at 747.453 kb on + strand, within SGL_RS05350 at 747.453 kb on + strand, within SGL_RS05350 at 747.463 kb on + strand, within SGL_RS05350 at 747.511 kb on + strand, within SGL_RS05350 at 747.519 kb on - strand, within SGL_RS05350 at 747.564 kb on + strand at 748.014 kb on + strand, within SGL_RS05355 at 748.019 kb on + strand, within SGL_RS05355 at 748.022 kb on - strand, within SGL_RS05355 at 748.053 kb on + strand, within SGL_RS05355 at 748.089 kb on - strand, within SGL_RS05355 at 748.095 kb on + strand, within SGL_RS05355 at 748.095 kb on + strand, within SGL_RS05355 at 748.315 kb on - strand, within SGL_RS05355 at 748.317 kb on + strand, within SGL_RS05355 at 748.317 kb on + strand, within SGL_RS05355 at 748.387 kb on + strand, within SGL_RS05355 at 748.395 kb on - strand, within SGL_RS05355 at 748.395 kb on - strand, within SGL_RS05355 at 748.395 kb on - strand, within SGL_RS05355 at 748.395 kb on - strand, within SGL_RS05355 at 748.512 kb on + strand, within SGL_RS05355 at 748.547 kb on + strand, within SGL_RS05355 at 748.607 kb on + strand, within SGL_RS05355 at 748.615 kb on - strand, within SGL_RS05355 at 748.780 kb on + strand, within SGL_RS05355 at 748.793 kb on + strand, within SGL_RS05355 at 748.793 kb on + strand, within SGL_RS05355 at 748.799 kb on + strand, within SGL_RS05355 at 748.847 kb on - strand, within SGL_RS05355 at 748.889 kb on + strand, within SGL_RS05355 at 748.908 kb on + strand at 748.908 kb on + strand at 748.913 kb on + strand at 748.926 kb on - strand at 748.944 kb on + strand at 748.952 kb on - strand at 749.063 kb on + strand at 749.180 kb on + strand at 749.298 kb on + strand, within SGL_RS05360 at 749.383 kb on - strand, within SGL_RS05360 at 749.393 kb on + strand, within SGL_RS05360 at 749.468 kb on - strand at 749.612 kb on - strand at 749.629 kb on - strand at 749.673 kb on - strand at 749.673 kb on - strand at 749.696 kb on + strand at 749.723 kb on + strand, within SGL_RS05365 at 749.723 kb on + strand, within SGL_RS05365 at 749.723 kb on + strand, within SGL_RS05365 at 749.731 kb on - strand, within SGL_RS05365 at 749.829 kb on + strand, within SGL_RS05365 at 749.860 kb on - strand, within SGL_RS05365
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 remove 746,620 - SGL_RS05345 0.44 -0.2 746,713 + SGL_RS05345 0.57 -0.3 746,733 + SGL_RS05345 0.60 +0.0 746,775 - SGL_RS05345 0.66 +0.2 746,828 + SGL_RS05345 0.73 -0.5 747,050 - -0.3 747,175 - -1.3 747,235 + +0.7 747,394 + SGL_RS05350 0.46 +1.0 747,433 - SGL_RS05350 0.58 +1.6 747,453 + SGL_RS05350 0.63 +1.0 747,453 + SGL_RS05350 0.63 +0.1 747,463 + SGL_RS05350 0.66 +1.2 747,511 + SGL_RS05350 0.80 +1.2 747,519 - SGL_RS05350 0.83 +2.2 747,564 + +0.5 748,014 + SGL_RS05355 0.30 +2.7 748,019 + SGL_RS05355 0.30 +2.3 748,022 - SGL_RS05355 0.31 +2.1 748,053 + SGL_RS05355 0.33 +2.6 748,089 - SGL_RS05355 0.35 +2.4 748,095 + SGL_RS05355 0.36 +2.8 748,095 + SGL_RS05355 0.36 +1.8 748,315 - SGL_RS05355 0.51 +2.6 748,317 + SGL_RS05355 0.51 +1.8 748,317 + SGL_RS05355 0.51 +2.1 748,387 + SGL_RS05355 0.55 +0.2 748,395 - SGL_RS05355 0.56 +1.6 748,395 - SGL_RS05355 0.56 +1.2 748,395 - SGL_RS05355 0.56 +1.9 748,395 - SGL_RS05355 0.56 +2.0 748,512 + SGL_RS05355 0.64 +2.0 748,547 + SGL_RS05355 0.66 +3.1 748,607 + SGL_RS05355 0.70 +2.5 748,615 - SGL_RS05355 0.71 +2.7 748,780 + SGL_RS05355 0.82 +1.7 748,793 + SGL_RS05355 0.83 +2.1 748,793 + SGL_RS05355 0.83 +2.1 748,799 + SGL_RS05355 0.84 +2.9 748,847 - SGL_RS05355 0.87 +2.6 748,889 + SGL_RS05355 0.90 +3.2 748,908 + +2.3 748,908 + +2.7 748,913 + +2.8 748,926 - +2.7 748,944 + +2.4 748,952 - +2.9 749,063 + -0.2 749,180 + +0.0 749,298 + SGL_RS05360 0.42 -0.2 749,383 - SGL_RS05360 0.66 -0.0 749,393 + SGL_RS05360 0.69 +0.4 749,468 - -0.6 749,612 - +0.2 749,629 - +0.1 749,673 - +0.4 749,673 - +1.8 749,696 + +1.3 749,723 + SGL_RS05365 0.12 +0.1 749,723 + SGL_RS05365 0.12 +0.4 749,723 + SGL_RS05365 0.12 +3.6 749,731 - SGL_RS05365 0.12 +0.4 749,829 + SGL_RS05365 0.19 +0.9 749,860 - SGL_RS05365 0.21 +0.1
Or see this region's nucleotide sequence