Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16085 and SGL_RS16090 are separated by 129 nucleotides SGL_RS16090 and SGL_RS16095 are separated by 11 nucleotides SGL_RS16095 and SGL_RS16100 are separated by 151 nucleotides
SGL_RS16085: SGL_RS16085 - heavy metal translocating P-type ATPase, at 3,058,411 to 3,060,339
_RS16085
SGL_RS16090: SGL_RS16090 - YnfA family protein, at 3,060,469 to 3,060,795
_RS16090
SGL_RS16095: SGL_RS16095 - Zn(II)-sensing metalloregulatory transcriptional repressor ZiaR, at 3,060,807 to 3,061,205
_RS16095
SGL_RS16100: SGL_RS16100 - heavy metal translocating P-type ATPase, at 3,061,357 to 3,063,522
_RS16100
Position (kb)
3060
3061
3062 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3059.908 kb on - strand, within SGL_RS16085 at 3059.930 kb on - strand, within SGL_RS16085 at 3059.945 kb on - strand, within SGL_RS16085 at 3060.016 kb on + strand, within SGL_RS16085 at 3060.043 kb on + strand, within SGL_RS16085 at 3060.091 kb on + strand, within SGL_RS16085 at 3060.151 kb on - strand at 3060.264 kb on + strand at 3060.309 kb on + strand at 3060.475 kb on - strand at 3060.475 kb on - strand at 3060.506 kb on + strand, within SGL_RS16090 at 3060.519 kb on - strand, within SGL_RS16090 at 3060.519 kb on - strand, within SGL_RS16090 at 3060.522 kb on + strand, within SGL_RS16090 at 3060.530 kb on - strand, within SGL_RS16090 at 3060.530 kb on - strand, within SGL_RS16090 at 3060.530 kb on - strand, within SGL_RS16090 at 3060.575 kb on + strand, within SGL_RS16090 at 3060.699 kb on + strand, within SGL_RS16090 at 3060.708 kb on - strand, within SGL_RS16090 at 3060.884 kb on - strand, within SGL_RS16095 at 3060.892 kb on - strand, within SGL_RS16095 at 3060.941 kb on + strand, within SGL_RS16095 at 3061.014 kb on + strand, within SGL_RS16095 at 3061.035 kb on + strand, within SGL_RS16095 at 3061.076 kb on + strand, within SGL_RS16095 at 3061.092 kb on + strand, within SGL_RS16095 at 3061.111 kb on + strand, within SGL_RS16095 at 3061.128 kb on - strand, within SGL_RS16095 at 3061.180 kb on + strand at 3061.209 kb on + strand at 3061.402 kb on + strand at 3061.468 kb on - strand at 3061.468 kb on - strand at 3061.468 kb on - strand at 3061.478 kb on - strand at 3061.502 kb on + strand at 3061.522 kb on - strand at 3061.522 kb on - strand at 3061.524 kb on + strand at 3061.524 kb on + strand at 3061.571 kb on - strand at 3061.571 kb on - strand at 3061.599 kb on + strand, within SGL_RS16100 at 3061.606 kb on - strand, within SGL_RS16100 at 3061.613 kb on + strand, within SGL_RS16100 at 3061.646 kb on + strand, within SGL_RS16100 at 3061.648 kb on - strand, within SGL_RS16100 at 3061.803 kb on + strand, within SGL_RS16100 at 3061.809 kb on + strand, within SGL_RS16100 at 3061.809 kb on + strand, within SGL_RS16100 at 3061.811 kb on + strand, within SGL_RS16100 at 3061.829 kb on - strand, within SGL_RS16100 at 3061.918 kb on - strand, within SGL_RS16100 at 3061.971 kb on + strand, within SGL_RS16100 at 3062.021 kb on - strand, within SGL_RS16100 at 3062.049 kb on + strand, within SGL_RS16100 at 3062.083 kb on + strand, within SGL_RS16100 at 3062.163 kb on + strand, within SGL_RS16100
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose remove 3,059,908 - SGL_RS16085 0.78 -0.1 3,059,930 - SGL_RS16085 0.79 -0.3 3,059,945 - SGL_RS16085 0.80 +1.3 3,060,016 + SGL_RS16085 0.83 +0.8 3,060,043 + SGL_RS16085 0.85 +0.3 3,060,091 + SGL_RS16085 0.87 -0.0 3,060,151 - -0.4 3,060,264 + -0.2 3,060,309 + -0.0 3,060,475 - -0.7 3,060,475 - -0.2 3,060,506 + SGL_RS16090 0.11 +0.4 3,060,519 - SGL_RS16090 0.15 +0.5 3,060,519 - SGL_RS16090 0.15 -0.1 3,060,522 + SGL_RS16090 0.16 +0.4 3,060,530 - SGL_RS16090 0.19 -0.6 3,060,530 - SGL_RS16090 0.19 +0.0 3,060,530 - SGL_RS16090 0.19 +0.2 3,060,575 + SGL_RS16090 0.32 +1.1 3,060,699 + SGL_RS16090 0.70 -0.0 3,060,708 - SGL_RS16090 0.73 -0.1 3,060,884 - SGL_RS16095 0.19 +0.1 3,060,892 - SGL_RS16095 0.21 -1.9 3,060,941 + SGL_RS16095 0.34 -1.6 3,061,014 + SGL_RS16095 0.52 -1.8 3,061,035 + SGL_RS16095 0.57 -0.5 3,061,076 + SGL_RS16095 0.67 -2.1 3,061,092 + SGL_RS16095 0.71 -0.9 3,061,111 + SGL_RS16095 0.76 -1.1 3,061,128 - SGL_RS16095 0.80 -2.3 3,061,180 + -1.9 3,061,209 + -0.7 3,061,402 + -2.9 3,061,468 - -1.5 3,061,468 - -1.3 3,061,468 - -0.5 3,061,478 - -0.5 3,061,502 + -1.5 3,061,522 - -2.9 3,061,522 - -2.5 3,061,524 + -3.1 3,061,524 + -0.9 3,061,571 - -3.2 3,061,571 - -2.3 3,061,599 + SGL_RS16100 0.11 -1.7 3,061,606 - SGL_RS16100 0.11 -1.3 3,061,613 + SGL_RS16100 0.12 -1.9 3,061,646 + SGL_RS16100 0.13 -1.3 3,061,648 - SGL_RS16100 0.13 -3.0 3,061,803 + SGL_RS16100 0.21 -1.3 3,061,809 + SGL_RS16100 0.21 -3.8 3,061,809 + SGL_RS16100 0.21 -0.9 3,061,811 + SGL_RS16100 0.21 -1.3 3,061,829 - SGL_RS16100 0.22 +0.5 3,061,918 - SGL_RS16100 0.26 -3.2 3,061,971 + SGL_RS16100 0.28 -2.7 3,062,021 - SGL_RS16100 0.31 -3.7 3,062,049 + SGL_RS16100 0.32 -2.1 3,062,083 + SGL_RS16100 0.34 -3.3 3,062,163 + SGL_RS16100 0.37 -1.3
Or see this region's nucleotide sequence