Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17120 and SGL_RS17125 are separated by 329 nucleotides SGL_RS17125 and SGL_RS17130 are separated by 75 nucleotides SGL_RS17130 and SGL_RS17135 are separated by 64 nucleotides
SGL_RS17120: SGL_RS17120 - response regulator transcription factor, at 3,294,498 to 3,295,250
_RS17120
SGL_RS17125: SGL_RS17125 - inositol monophosphatase family protein, at 3,295,580 to 3,296,386
_RS17125
SGL_RS17130: SGL_RS17130 - hypothetical protein, at 3,296,462 to 3,297,247
_RS17130
SGL_RS17135: SGL_RS17135 - Crp/Fnr family transcriptional regulator, at 3,297,312 to 3,298,097
_RS17135
Position (kb)
3295
3296
3297 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3294.607 kb on + strand, within SGL_RS17120 at 3294.607 kb on + strand, within SGL_RS17120 at 3294.607 kb on + strand, within SGL_RS17120 at 3294.611 kb on + strand, within SGL_RS17120 at 3294.703 kb on + strand, within SGL_RS17120 at 3294.706 kb on - strand, within SGL_RS17120 at 3294.717 kb on + strand, within SGL_RS17120 at 3294.764 kb on + strand, within SGL_RS17120 at 3294.967 kb on + strand, within SGL_RS17120 at 3294.967 kb on + strand, within SGL_RS17120 at 3294.987 kb on + strand, within SGL_RS17120 at 3295.058 kb on + strand, within SGL_RS17120 at 3295.155 kb on + strand, within SGL_RS17120 at 3295.176 kb on + strand at 3295.184 kb on - strand at 3295.199 kb on - strand at 3295.247 kb on - strand at 3295.502 kb on + strand at 3295.636 kb on + strand at 3295.758 kb on - strand, within SGL_RS17125 at 3295.932 kb on + strand, within SGL_RS17125 at 3296.128 kb on + strand, within SGL_RS17125 at 3296.148 kb on + strand, within SGL_RS17125 at 3296.201 kb on - strand, within SGL_RS17125 at 3296.315 kb on + strand at 3296.365 kb on - strand at 3296.408 kb on - strand at 3296.552 kb on + strand, within SGL_RS17130 at 3296.590 kb on + strand, within SGL_RS17130 at 3296.599 kb on + strand, within SGL_RS17130 at 3296.670 kb on - strand, within SGL_RS17130 at 3296.779 kb on - strand, within SGL_RS17130 at 3296.799 kb on + strand, within SGL_RS17130 at 3296.836 kb on - strand, within SGL_RS17130 at 3296.892 kb on - strand, within SGL_RS17130 at 3296.893 kb on - strand, within SGL_RS17130 at 3296.920 kb on - strand, within SGL_RS17130 at 3297.073 kb on - strand, within SGL_RS17130 at 3297.074 kb on - strand, within SGL_RS17130 at 3297.133 kb on - strand, within SGL_RS17130 at 3297.180 kb on - strand at 3297.336 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 3,294,607 + SGL_RS17120 0.14 -4.4 3,294,607 + SGL_RS17120 0.14 +0.9 3,294,607 + SGL_RS17120 0.14 -3.9 3,294,611 + SGL_RS17120 0.15 -3.3 3,294,703 + SGL_RS17120 0.27 -3.3 3,294,706 - SGL_RS17120 0.28 -2.3 3,294,717 + SGL_RS17120 0.29 -1.7 3,294,764 + SGL_RS17120 0.35 -4.4 3,294,967 + SGL_RS17120 0.62 -4.3 3,294,967 + SGL_RS17120 0.62 -3.1 3,294,987 + SGL_RS17120 0.65 -5.6 3,295,058 + SGL_RS17120 0.74 -3.9 3,295,155 + SGL_RS17120 0.87 -4.0 3,295,176 + -1.6 3,295,184 - -4.4 3,295,199 - -4.2 3,295,247 - -5.0 3,295,502 + -0.3 3,295,636 + -3.2 3,295,758 - SGL_RS17125 0.22 -2.9 3,295,932 + SGL_RS17125 0.44 -3.1 3,296,128 + SGL_RS17125 0.68 -2.8 3,296,148 + SGL_RS17125 0.70 -2.0 3,296,201 - SGL_RS17125 0.77 -2.9 3,296,315 + -1.1 3,296,365 - -3.1 3,296,408 - -0.5 3,296,552 + SGL_RS17130 0.11 -0.8 3,296,590 + SGL_RS17130 0.16 -0.5 3,296,599 + SGL_RS17130 0.17 -0.3 3,296,670 - SGL_RS17130 0.26 -0.4 3,296,779 - SGL_RS17130 0.40 -0.3 3,296,799 + SGL_RS17130 0.43 +0.0 3,296,836 - SGL_RS17130 0.48 -0.5 3,296,892 - SGL_RS17130 0.55 -0.2 3,296,893 - SGL_RS17130 0.55 -0.1 3,296,920 - SGL_RS17130 0.58 -0.9 3,297,073 - SGL_RS17130 0.78 -0.3 3,297,074 - SGL_RS17130 0.78 -0.9 3,297,133 - SGL_RS17130 0.85 -0.4 3,297,180 - -0.8 3,297,336 - -0.5
Or see this region's nucleotide sequence