Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15915 and SGL_RS15920 are separated by 71 nucleotides SGL_RS15920 and SGL_RS15925 are separated by 123 nucleotides
SGL_RS15915: SGL_RS15915 - bifunctional metallophosphatase/5'-nucleotidase, at 3,020,301 to 3,021,821
_RS15915
SGL_RS15920: SGL_RS15920 - GNAT family N-acetyltransferase, at 3,021,893 to 3,022,408
_RS15920
SGL_RS15925: SGL_RS15925 - ATP-binding protein, at 3,022,532 to 3,024,271
_RS15925
Position (kb)
3021
3022
3023 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3020.904 kb on - strand, within SGL_RS15915 at 3021.132 kb on - strand, within SGL_RS15915 at 3021.142 kb on - strand, within SGL_RS15915 at 3021.213 kb on + strand, within SGL_RS15915 at 3021.219 kb on - strand, within SGL_RS15915 at 3021.347 kb on - strand, within SGL_RS15915 at 3021.393 kb on - strand, within SGL_RS15915 at 3021.408 kb on - strand, within SGL_RS15915 at 3021.430 kb on - strand, within SGL_RS15915 at 3021.450 kb on - strand, within SGL_RS15915 at 3021.458 kb on - strand, within SGL_RS15915 at 3021.494 kb on + strand, within SGL_RS15915 at 3021.523 kb on - strand, within SGL_RS15915 at 3021.620 kb on + strand, within SGL_RS15915 at 3021.625 kb on + strand, within SGL_RS15915 at 3021.633 kb on - strand, within SGL_RS15915 at 3021.925 kb on + strand at 3021.925 kb on + strand at 3021.933 kb on - strand at 3021.970 kb on + strand, within SGL_RS15920 at 3021.971 kb on + strand, within SGL_RS15920 at 3022.045 kb on - strand, within SGL_RS15920 at 3022.045 kb on - strand, within SGL_RS15920 at 3022.049 kb on + strand, within SGL_RS15920 at 3022.049 kb on + strand, within SGL_RS15920 at 3022.069 kb on + strand, within SGL_RS15920 at 3022.069 kb on + strand, within SGL_RS15920 at 3022.069 kb on - strand, within SGL_RS15920 at 3022.103 kb on + strand, within SGL_RS15920 at 3022.141 kb on + strand, within SGL_RS15920 at 3022.196 kb on + strand, within SGL_RS15920 at 3022.251 kb on - strand, within SGL_RS15920 at 3022.274 kb on + strand, within SGL_RS15920 at 3022.281 kb on - strand, within SGL_RS15920 at 3022.352 kb on + strand, within SGL_RS15920 at 3022.454 kb on + strand at 3022.526 kb on - strand at 3022.568 kb on + strand at 3022.576 kb on - strand at 3022.646 kb on + strand at 3022.662 kb on + strand at 3022.672 kb on + strand at 3022.677 kb on - strand at 3022.679 kb on + strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.715 kb on + strand, within SGL_RS15925 at 3022.723 kb on - strand, within SGL_RS15925 at 3022.847 kb on - strand, within SGL_RS15925 at 3022.962 kb on - strand, within SGL_RS15925 at 3023.049 kb on - strand, within SGL_RS15925 at 3023.064 kb on - strand, within SGL_RS15925 at 3023.345 kb on + strand, within SGL_RS15925
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 3,020,904 - SGL_RS15915 0.40 -0.6 3,021,132 - SGL_RS15915 0.55 -0.1 3,021,142 - SGL_RS15915 0.55 -0.3 3,021,213 + SGL_RS15915 0.60 -0.1 3,021,219 - SGL_RS15915 0.60 -0.1 3,021,347 - SGL_RS15915 0.69 +0.2 3,021,393 - SGL_RS15915 0.72 +0.8 3,021,408 - SGL_RS15915 0.73 -0.2 3,021,430 - SGL_RS15915 0.74 +0.4 3,021,450 - SGL_RS15915 0.76 -0.6 3,021,458 - SGL_RS15915 0.76 -0.1 3,021,494 + SGL_RS15915 0.78 -0.1 3,021,523 - SGL_RS15915 0.80 +0.3 3,021,620 + SGL_RS15915 0.87 -0.3 3,021,625 + SGL_RS15915 0.87 -1.1 3,021,633 - SGL_RS15915 0.88 +0.1 3,021,925 + -0.5 3,021,925 + -1.2 3,021,933 - -0.6 3,021,970 + SGL_RS15920 0.15 -1.2 3,021,971 + SGL_RS15920 0.15 -2.5 3,022,045 - SGL_RS15920 0.29 -1.1 3,022,045 - SGL_RS15920 0.29 -1.7 3,022,049 + SGL_RS15920 0.30 -3.4 3,022,049 + SGL_RS15920 0.30 -1.8 3,022,069 + SGL_RS15920 0.34 -0.7 3,022,069 + SGL_RS15920 0.34 -0.9 3,022,069 - SGL_RS15920 0.34 -0.6 3,022,103 + SGL_RS15920 0.41 -2.0 3,022,141 + SGL_RS15920 0.48 -2.8 3,022,196 + SGL_RS15920 0.59 -2.3 3,022,251 - SGL_RS15920 0.69 +0.2 3,022,274 + SGL_RS15920 0.74 -1.6 3,022,281 - SGL_RS15920 0.75 -0.7 3,022,352 + SGL_RS15920 0.89 -2.6 3,022,454 + -1.2 3,022,526 - -0.2 3,022,568 + -1.0 3,022,576 - -1.5 3,022,646 + -1.0 3,022,662 + -3.2 3,022,672 + -1.4 3,022,677 - -4.5 3,022,679 + -2.7 3,022,687 - -0.9 3,022,687 - -1.1 3,022,687 - -2.5 3,022,687 - -1.8 3,022,687 - -2.5 3,022,715 + SGL_RS15925 0.11 -2.6 3,022,723 - SGL_RS15925 0.11 -0.1 3,022,847 - SGL_RS15925 0.18 -0.8 3,022,962 - SGL_RS15925 0.25 -1.8 3,023,049 - SGL_RS15925 0.30 -1.3 3,023,064 - SGL_RS15925 0.31 +0.6 3,023,345 + SGL_RS15925 0.47 -2.6
Or see this region's nucleotide sequence