Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15615 and SGL_RS19485 are separated by 88 nucleotides SGL_RS19485 and SGL_RS15620 are separated by 90 nucleotides SGL_RS15620 and SGL_RS15625 are separated by 17 nucleotides
SGL_RS15615: SGL_RS15615 - mechanosensitive ion channel family protein, at 2,952,561 to 2,954,255
_RS15615
SGL_RS19485: SGL_RS19485 - hypothetical protein, at 2,954,344 to 2,954,502
_RS19485
SGL_RS15620: SGL_RS15620 - cobyric acid synthase CobQ, at 2,954,593 to 2,956,089
_RS15620
SGL_RS15625: SGL_RS15625 - amidohydrolase family protein, at 2,956,107 to 2,957,153
_RS15625
Position (kb)
2954
2955
2956
2957 Strain fitness (log2 ratio)
-2
-1
0
1 at 2953.795 kb on + strand, within SGL_RS15615 at 2953.803 kb on - strand, within SGL_RS15615 at 2953.829 kb on + strand, within SGL_RS15615 at 2954.029 kb on + strand, within SGL_RS15615 at 2954.043 kb on - strand, within SGL_RS15615 at 2954.445 kb on + strand, within SGL_RS19485 at 2954.498 kb on + strand at 2954.519 kb on + strand at 2954.519 kb on - strand at 2954.551 kb on - strand at 2954.689 kb on - strand at 2954.778 kb on - strand, within SGL_RS15620 at 2954.821 kb on - strand, within SGL_RS15620 at 2954.991 kb on + strand, within SGL_RS15620 at 2955.202 kb on + strand, within SGL_RS15620 at 2955.350 kb on + strand, within SGL_RS15620 at 2955.355 kb on + strand, within SGL_RS15620 at 2955.475 kb on + strand, within SGL_RS15620 at 2955.593 kb on + strand, within SGL_RS15620 at 2955.947 kb on + strand at 2955.954 kb on - strand at 2956.084 kb on + strand at 2956.092 kb on - strand at 2956.174 kb on - strand at 2956.243 kb on - strand, within SGL_RS15625 at 2956.304 kb on - strand, within SGL_RS15625 at 2956.359 kb on - strand, within SGL_RS15625 at 2956.386 kb on - strand, within SGL_RS15625 at 2956.386 kb on - strand, within SGL_RS15625 at 2956.391 kb on - strand, within SGL_RS15625 at 2956.430 kb on - strand, within SGL_RS15625 at 2956.466 kb on + strand, within SGL_RS15625 at 2956.484 kb on - strand, within SGL_RS15625 at 2956.516 kb on + strand, within SGL_RS15625 at 2956.558 kb on - strand, within SGL_RS15625 at 2956.560 kb on - strand, within SGL_RS15625 at 2956.607 kb on + strand, within SGL_RS15625 at 2956.634 kb on + strand, within SGL_RS15625 at 2956.645 kb on - strand, within SGL_RS15625 at 2956.656 kb on - strand, within SGL_RS15625 at 2956.811 kb on - strand, within SGL_RS15625 at 2956.811 kb on - strand, within SGL_RS15625 at 2956.833 kb on - strand, within SGL_RS15625 at 2957.019 kb on + strand, within SGL_RS15625 at 2957.019 kb on + strand, within SGL_RS15625 at 2957.027 kb on - strand, within SGL_RS15625
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 2,953,795 + SGL_RS15615 0.73 -0.3 2,953,803 - SGL_RS15615 0.73 -0.0 2,953,829 + SGL_RS15615 0.75 -0.2 2,954,029 + SGL_RS15615 0.87 +0.2 2,954,043 - SGL_RS15615 0.87 +0.4 2,954,445 + SGL_RS19485 0.64 -0.1 2,954,498 + -0.0 2,954,519 + +0.2 2,954,519 - +0.2 2,954,551 - -0.0 2,954,689 - +1.4 2,954,778 - SGL_RS15620 0.12 -0.1 2,954,821 - SGL_RS15620 0.15 -0.9 2,954,991 + SGL_RS15620 0.27 +1.4 2,955,202 + SGL_RS15620 0.41 +0.4 2,955,350 + SGL_RS15620 0.51 -2.0 2,955,355 + SGL_RS15620 0.51 -0.9 2,955,475 + SGL_RS15620 0.59 -0.9 2,955,593 + SGL_RS15620 0.67 +1.4 2,955,947 + -0.7 2,955,954 - -0.6 2,956,084 + +0.2 2,956,092 - -1.5 2,956,174 - -0.8 2,956,243 - SGL_RS15625 0.13 -0.1 2,956,304 - SGL_RS15625 0.19 +0.0 2,956,359 - SGL_RS15625 0.24 +0.2 2,956,386 - SGL_RS15625 0.27 -0.2 2,956,386 - SGL_RS15625 0.27 +0.1 2,956,391 - SGL_RS15625 0.27 +0.6 2,956,430 - SGL_RS15625 0.31 +0.1 2,956,466 + SGL_RS15625 0.34 -0.4 2,956,484 - SGL_RS15625 0.36 -0.1 2,956,516 + SGL_RS15625 0.39 +0.2 2,956,558 - SGL_RS15625 0.43 +0.1 2,956,560 - SGL_RS15625 0.43 -0.3 2,956,607 + SGL_RS15625 0.48 +0.6 2,956,634 + SGL_RS15625 0.50 +0.2 2,956,645 - SGL_RS15625 0.51 -0.0 2,956,656 - SGL_RS15625 0.52 -0.3 2,956,811 - SGL_RS15625 0.67 +0.1 2,956,811 - SGL_RS15625 0.67 +0.3 2,956,833 - SGL_RS15625 0.69 +0.2 2,957,019 + SGL_RS15625 0.87 +0.1 2,957,019 + SGL_RS15625 0.87 +0.1 2,957,027 - SGL_RS15625 0.88 +0.3
Or see this region's nucleotide sequence