Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS19060 and SGL_RS15525 are separated by 201 nucleotides SGL_RS15525 and SGL_RS15530 overlap by 4 nucleotides SGL_RS15530 and SGL_RS15535 are separated by 58 nucleotides
SGL_RS19060: SGL_RS19060 - AbfB domain-containing protein, at 2,931,476 to 2,932,009
_RS19060
SGL_RS15525: SGL_RS15525 - phosphoribosylformylglycinamidine synthase subunit PurS, at 2,932,211 to 2,932,513
_RS15525
SGL_RS15530: SGL_RS15530 - phosphoribosylformylglycinamidine synthase subunit PurQ, at 2,932,510 to 2,933,184
_RS15530
SGL_RS15535: SGL_RS15535 - EamA family transporter, at 2,933,243 to 2,934,172
_RS15535
Position (kb)
2932
2933
2934 Strain fitness (log2 ratio)
-1
0
1 at 2931.613 kb on + strand, within SGL_RS19060 at 2931.640 kb on + strand, within SGL_RS19060 at 2931.681 kb on + strand, within SGL_RS19060 at 2932.066 kb on + strand at 2932.125 kb on + strand at 2932.379 kb on - strand, within SGL_RS15525 at 2932.515 kb on - strand at 2932.650 kb on - strand, within SGL_RS15530 at 2932.669 kb on - strand, within SGL_RS15530 at 2932.696 kb on - strand, within SGL_RS15530 at 2932.896 kb on + strand, within SGL_RS15530 at 2932.914 kb on + strand, within SGL_RS15530 at 2932.978 kb on + strand, within SGL_RS15530 at 2933.097 kb on - strand, within SGL_RS15530 at 2933.210 kb on - strand at 2933.225 kb on - strand at 2933.286 kb on + strand at 2933.331 kb on + strand at 2933.357 kb on + strand, within SGL_RS15535 at 2933.424 kb on - strand, within SGL_RS15535 at 2933.559 kb on + strand, within SGL_RS15535 at 2933.559 kb on + strand, within SGL_RS15535 at 2933.559 kb on + strand, within SGL_RS15535 at 2933.567 kb on - strand, within SGL_RS15535 at 2933.643 kb on - strand, within SGL_RS15535 at 2933.658 kb on + strand, within SGL_RS15535 at 2933.894 kb on - strand, within SGL_RS15535 at 2933.993 kb on - strand, within SGL_RS15535 at 2933.993 kb on - strand, within SGL_RS15535 at 2933.993 kb on - strand, within SGL_RS15535 at 2934.024 kb on - strand, within SGL_RS15535 at 2934.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 2,931,613 + SGL_RS19060 0.26 +0.1 2,931,640 + SGL_RS19060 0.31 +0.4 2,931,681 + SGL_RS19060 0.38 -0.3 2,932,066 + +0.3 2,932,125 + +0.0 2,932,379 - SGL_RS15525 0.55 -1.1 2,932,515 - -0.5 2,932,650 - SGL_RS15530 0.21 -0.5 2,932,669 - SGL_RS15530 0.24 -0.5 2,932,696 - SGL_RS15530 0.28 -0.9 2,932,896 + SGL_RS15530 0.57 +0.5 2,932,914 + SGL_RS15530 0.60 -0.9 2,932,978 + SGL_RS15530 0.69 -1.3 2,933,097 - SGL_RS15530 0.87 +1.5 2,933,210 - +0.2 2,933,225 - +0.0 2,933,286 + -0.6 2,933,331 + -0.9 2,933,357 + SGL_RS15535 0.12 -0.4 2,933,424 - SGL_RS15535 0.19 -0.9 2,933,559 + SGL_RS15535 0.34 -1.0 2,933,559 + SGL_RS15535 0.34 +0.1 2,933,559 + SGL_RS15535 0.34 -0.9 2,933,567 - SGL_RS15535 0.35 -0.4 2,933,643 - SGL_RS15535 0.43 -1.4 2,933,658 + SGL_RS15535 0.45 -0.9 2,933,894 - SGL_RS15535 0.70 -1.3 2,933,993 - SGL_RS15535 0.81 +0.7 2,933,993 - SGL_RS15535 0.81 +0.3 2,933,993 - SGL_RS15535 0.81 -1.7 2,934,024 - SGL_RS15535 0.84 -1.1 2,934,171 + -0.4
Or see this region's nucleotide sequence