Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15360

Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS15355 and SGL_RS15360 are separated by 56 nucleotidesSGL_RS15360 and SGL_RS15365 are separated by 8 nucleotidesSGL_RS15365 and SGL_RS15370 are separated by 117 nucleotides SGL_RS15355: SGL_RS15355 - 4-hydroxyphenylpyruvate dioxygenase, at 2,897,634 to 2,898,653 _RS15355 SGL_RS15360: SGL_RS15360 - aldehyde dehydrogenase family protein, at 2,898,710 to 2,900,080 _RS15360 SGL_RS15365: SGL_RS15365 - TIGR04283 family arsenosugar biosynthesis glycosyltransferase, at 2,900,089 to 2,900,862 _RS15365 SGL_RS15370: SGL_RS15370 - DnaJ C-terminal domain-containing protein, at 2,900,980 to 2,901,978 _RS15370 Position (kb) 2898 2899 2900 2901Strain fitness (log2 ratio) -1 0 1at 2897.810 kb on - strand, within SGL_RS15355at 2898.048 kb on - strand, within SGL_RS15355at 2898.054 kb on + strand, within SGL_RS15355at 2898.069 kb on + strand, within SGL_RS15355at 2898.103 kb on - strand, within SGL_RS15355at 2898.187 kb on - strand, within SGL_RS15355at 2898.187 kb on - strand, within SGL_RS15355at 2898.187 kb on - strand, within SGL_RS15355at 2898.189 kb on + strand, within SGL_RS15355at 2898.197 kb on - strand, within SGL_RS15355at 2898.449 kb on - strand, within SGL_RS15355at 2898.784 kb on - strandat 2898.831 kb on - strandat 2898.952 kb on + strand, within SGL_RS15360at 2898.966 kb on + strand, within SGL_RS15360at 2899.019 kb on - strand, within SGL_RS15360at 2899.021 kb on + strand, within SGL_RS15360at 2899.202 kb on + strand, within SGL_RS15360at 2899.359 kb on + strand, within SGL_RS15360at 2899.367 kb on - strand, within SGL_RS15360at 2899.373 kb on + strand, within SGL_RS15360at 2899.546 kb on - strand, within SGL_RS15360at 2899.553 kb on - strand, within SGL_RS15360at 2899.855 kb on + strand, within SGL_RS15360at 2900.093 kb on - strandat 2900.249 kb on + strand, within SGL_RS15365at 2900.256 kb on - strand, within SGL_RS15365at 2900.260 kb on + strand, within SGL_RS15365at 2900.312 kb on - strand, within SGL_RS15365at 2900.708 kb on + strand, within SGL_RS15365at 2900.796 kb on - strandat 2900.848 kb on - strandat 2900.866 kb on + strandat 2900.877 kb on + strandat 2900.877 kb on + strandat 2900.877 kb on + strandat 2900.879 kb on - strandat 2900.886 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth
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2,897,810 - SGL_RS15355 0.17 +0.3
2,898,048 - SGL_RS15355 0.41 -0.2
2,898,054 + SGL_RS15355 0.41 -0.3
2,898,069 + SGL_RS15355 0.43 +0.2
2,898,103 - SGL_RS15355 0.46 -0.2
2,898,187 - SGL_RS15355 0.54 -0.1
2,898,187 - SGL_RS15355 0.54 -0.2
2,898,187 - SGL_RS15355 0.54 -0.7
2,898,189 + SGL_RS15355 0.54 -0.3
2,898,197 - SGL_RS15355 0.55 -0.3
2,898,449 - SGL_RS15355 0.80 -0.2
2,898,784 - -0.4
2,898,831 - -0.4
2,898,952 + SGL_RS15360 0.18 -0.8
2,898,966 + SGL_RS15360 0.19 -0.3
2,899,019 - SGL_RS15360 0.23 +0.8
2,899,021 + SGL_RS15360 0.23 +0.4
2,899,202 + SGL_RS15360 0.36 -0.3
2,899,359 + SGL_RS15360 0.47 +0.1
2,899,367 - SGL_RS15360 0.48 +0.2
2,899,373 + SGL_RS15360 0.48 -0.0
2,899,546 - SGL_RS15360 0.61 +0.4
2,899,553 - SGL_RS15360 0.61 +0.5
2,899,855 + SGL_RS15360 0.84 -0.6
2,900,093 - +0.5
2,900,249 + SGL_RS15365 0.21 +0.7
2,900,256 - SGL_RS15365 0.22 -0.6
2,900,260 + SGL_RS15365 0.22 +0.0
2,900,312 - SGL_RS15365 0.29 -0.0
2,900,708 + SGL_RS15365 0.80 +0.1
2,900,796 - -0.3
2,900,848 - +0.2
2,900,866 + -0.9
2,900,877 + -0.4
2,900,877 + -0.0
2,900,877 + -0.4
2,900,879 - -0.8
2,900,886 - -0.6

Or see this region's nucleotide sequence