Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15125 and SGL_RS15130 are separated by 30 nucleotides SGL_RS15130 and SGL_RS15135 are separated by 66 nucleotides SGL_RS15135 and SGL_RS15140 are separated by 107 nucleotides
SGL_RS15125: SGL_RS15125 - MoxR family ATPase, at 2,842,772 to 2,843,683
_RS15125
SGL_RS15130: SGL_RS15130 - dTDP-glucose 4,6-dehydratase, at 2,843,714 to 2,844,742
_RS15130
SGL_RS15135: SGL_RS15135 - hypothetical protein, at 2,844,809 to 2,845,072
_RS15135
SGL_RS15140: SGL_RS15140 - elongation factor G, at 2,845,180 to 2,847,189
_RS15140
Position (kb)
2843
2844
2845 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2842.722 kb on - strand at 2842.822 kb on + strand at 2842.836 kb on - strand at 2842.861 kb on + strand at 2842.878 kb on - strand, within SGL_RS15125 at 2842.890 kb on - strand, within SGL_RS15125 at 2842.969 kb on - strand, within SGL_RS15125 at 2843.213 kb on + strand, within SGL_RS15125 at 2843.336 kb on - strand, within SGL_RS15125 at 2843.441 kb on + strand, within SGL_RS15125 at 2843.441 kb on + strand, within SGL_RS15125 at 2843.449 kb on - strand, within SGL_RS15125 at 2843.449 kb on - strand, within SGL_RS15125 at 2843.451 kb on - strand, within SGL_RS15125 at 2843.490 kb on + strand, within SGL_RS15125 at 2843.511 kb on - strand, within SGL_RS15125 at 2843.534 kb on + strand, within SGL_RS15125 at 2843.609 kb on - strand at 2843.768 kb on - strand at 2844.027 kb on - strand, within SGL_RS15130 at 2844.089 kb on + strand, within SGL_RS15130 at 2844.187 kb on - strand, within SGL_RS15130 at 2844.331 kb on + strand, within SGL_RS15130 at 2844.409 kb on + strand, within SGL_RS15130 at 2844.419 kb on + strand, within SGL_RS15130 at 2844.451 kb on - strand, within SGL_RS15130 at 2844.466 kb on - strand, within SGL_RS15130 at 2844.649 kb on - strand at 2844.662 kb on - strand at 2844.728 kb on - strand at 2844.732 kb on + strand at 2844.889 kb on - strand, within SGL_RS15135 at 2844.908 kb on + strand, within SGL_RS15135 at 2844.993 kb on + strand, within SGL_RS15135 at 2845.109 kb on - strand at 2845.228 kb on - strand at 2845.252 kb on - strand at 2845.512 kb on + strand, within SGL_RS15140 at 2845.520 kb on - strand, within SGL_RS15140 at 2845.524 kb on + strand, within SGL_RS15140 at 2845.576 kb on + strand, within SGL_RS15140 at 2845.584 kb on - strand, within SGL_RS15140 at 2845.589 kb on - strand, within SGL_RS15140 at 2845.686 kb on + strand, within SGL_RS15140 at 2845.723 kb on + strand, within SGL_RS15140
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 2,842,722 - -0.3 2,842,822 + +0.4 2,842,836 - -1.0 2,842,861 + -0.1 2,842,878 - SGL_RS15125 0.12 -0.1 2,842,890 - SGL_RS15125 0.13 -1.6 2,842,969 - SGL_RS15125 0.22 -0.7 2,843,213 + SGL_RS15125 0.48 -0.2 2,843,336 - SGL_RS15125 0.62 -0.8 2,843,441 + SGL_RS15125 0.73 -0.2 2,843,441 + SGL_RS15125 0.73 -0.7 2,843,449 - SGL_RS15125 0.74 -0.9 2,843,449 - SGL_RS15125 0.74 -1.6 2,843,451 - SGL_RS15125 0.74 -0.4 2,843,490 + SGL_RS15125 0.79 -0.5 2,843,511 - SGL_RS15125 0.81 -1.8 2,843,534 + SGL_RS15125 0.84 -0.2 2,843,609 - -0.5 2,843,768 - -4.8 2,844,027 - SGL_RS15130 0.30 -4.7 2,844,089 + SGL_RS15130 0.36 -5.9 2,844,187 - SGL_RS15130 0.46 -5.7 2,844,331 + SGL_RS15130 0.60 -5.1 2,844,409 + SGL_RS15130 0.68 -2.8 2,844,419 + SGL_RS15130 0.69 -4.0 2,844,451 - SGL_RS15130 0.72 -5.8 2,844,466 - SGL_RS15130 0.73 -4.7 2,844,649 - -4.2 2,844,662 - -2.6 2,844,728 - -0.3 2,844,732 + -0.4 2,844,889 - SGL_RS15135 0.30 -0.2 2,844,908 + SGL_RS15135 0.38 +0.0 2,844,993 + SGL_RS15135 0.70 +0.7 2,845,109 - -0.2 2,845,228 - -0.7 2,845,252 - +0.7 2,845,512 + SGL_RS15140 0.17 +0.6 2,845,520 - SGL_RS15140 0.17 +0.8 2,845,524 + SGL_RS15140 0.17 +0.3 2,845,576 + SGL_RS15140 0.20 -0.6 2,845,584 - SGL_RS15140 0.20 +0.4 2,845,589 - SGL_RS15140 0.20 +0.4 2,845,686 + SGL_RS15140 0.25 +0.0 2,845,723 + SGL_RS15140 0.27 -0.2
Or see this region's nucleotide sequence