Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09540 and SGL_RS09545 overlap by 4 nucleotides SGL_RS09545 and SGL_RS09550 are separated by 13 nucleotides SGL_RS09550 and SGL_RS09555 overlap by 4 nucleotides
SGL_RS09540: SGL_RS09540 - glycosyltransferase, at 1,633,422 to 1,634,414
_RS09540
SGL_RS09545: SGL_RS09545 - cyclase family protein, at 1,634,411 to 1,635,058
_RS09545
SGL_RS09550: SGL_RS09550 - acylneuraminate cytidylyltransferase, at 1,635,072 to 1,635,749
_RS09550
SGL_RS09555: SGL_RS09555 - phosphoglycerate dehydrogenase, at 1,635,746 to 1,636,702
_RS09555
Position (kb)
1634
1635
1636 Strain fitness (log2 ratio)
-2
-1
0
1 at 1633.476 kb on + strand at 1633.545 kb on + strand, within SGL_RS09540 at 1633.554 kb on + strand, within SGL_RS09540 at 1633.566 kb on + strand, within SGL_RS09540 at 1633.571 kb on + strand, within SGL_RS09540 at 1633.649 kb on + strand, within SGL_RS09540 at 1633.652 kb on - strand, within SGL_RS09540 at 1633.693 kb on - strand, within SGL_RS09540 at 1633.706 kb on - strand, within SGL_RS09540 at 1633.706 kb on - strand, within SGL_RS09540 at 1633.777 kb on + strand, within SGL_RS09540 at 1633.778 kb on - strand, within SGL_RS09540 at 1633.860 kb on + strand, within SGL_RS09540 at 1633.926 kb on - strand, within SGL_RS09540 at 1633.941 kb on + strand, within SGL_RS09540 at 1633.949 kb on - strand, within SGL_RS09540 at 1633.949 kb on - strand, within SGL_RS09540 at 1633.949 kb on - strand, within SGL_RS09540 at 1633.954 kb on - strand, within SGL_RS09540 at 1634.010 kb on + strand, within SGL_RS09540 at 1634.029 kb on + strand, within SGL_RS09540 at 1634.029 kb on + strand, within SGL_RS09540 at 1634.029 kb on + strand, within SGL_RS09540 at 1634.031 kb on - strand, within SGL_RS09540 at 1634.037 kb on - strand, within SGL_RS09540 at 1634.037 kb on - strand, within SGL_RS09540 at 1634.122 kb on + strand, within SGL_RS09540 at 1634.132 kb on + strand, within SGL_RS09540 at 1634.134 kb on + strand, within SGL_RS09540 at 1634.134 kb on + strand, within SGL_RS09540 at 1634.142 kb on - strand, within SGL_RS09540 at 1634.197 kb on - strand, within SGL_RS09540 at 1634.243 kb on - strand, within SGL_RS09540 at 1634.263 kb on - strand, within SGL_RS09540 at 1634.509 kb on - strand, within SGL_RS09545 at 1634.510 kb on - strand, within SGL_RS09545 at 1634.538 kb on + strand, within SGL_RS09545 at 1634.543 kb on + strand, within SGL_RS09545 at 1634.546 kb on - strand, within SGL_RS09545 at 1634.551 kb on - strand, within SGL_RS09545 at 1634.618 kb on + strand, within SGL_RS09545 at 1634.618 kb on + strand, within SGL_RS09545 at 1634.644 kb on - strand, within SGL_RS09545 at 1634.644 kb on - strand, within SGL_RS09545 at 1634.668 kb on - strand, within SGL_RS09545 at 1634.689 kb on + strand, within SGL_RS09545 at 1634.715 kb on - strand, within SGL_RS09545 at 1634.719 kb on - strand, within SGL_RS09545 at 1634.865 kb on + strand, within SGL_RS09545 at 1634.901 kb on - strand, within SGL_RS09545 at 1634.927 kb on - strand, within SGL_RS09545 at 1634.929 kb on + strand, within SGL_RS09545 at 1634.950 kb on + strand, within SGL_RS09545 at 1634.950 kb on + strand, within SGL_RS09545 at 1635.095 kb on + strand at 1635.116 kb on - strand at 1635.180 kb on + strand, within SGL_RS09550 at 1635.188 kb on - strand, within SGL_RS09550 at 1635.197 kb on - strand, within SGL_RS09550 at 1635.250 kb on + strand, within SGL_RS09550 at 1635.258 kb on + strand, within SGL_RS09550 at 1635.258 kb on + strand, within SGL_RS09550 at 1635.281 kb on + strand, within SGL_RS09550 at 1635.291 kb on - strand, within SGL_RS09550 at 1635.312 kb on + strand, within SGL_RS09550 at 1635.312 kb on + strand, within SGL_RS09550 at 1635.312 kb on + strand, within SGL_RS09550 at 1635.320 kb on - strand, within SGL_RS09550 at 1635.338 kb on + strand, within SGL_RS09550 at 1635.346 kb on + strand, within SGL_RS09550 at 1635.494 kb on + strand, within SGL_RS09550 at 1635.549 kb on + strand, within SGL_RS09550 at 1635.782 kb on + strand at 1635.789 kb on + strand at 1635.790 kb on - strand at 1635.797 kb on - strand at 1635.797 kb on - strand at 1635.985 kb on + strand, within SGL_RS09555
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 1,633,476 + +0.9 1,633,545 + SGL_RS09540 0.12 -0.6 1,633,554 + SGL_RS09540 0.13 -0.5 1,633,566 + SGL_RS09540 0.15 -1.0 1,633,571 + SGL_RS09540 0.15 -1.0 1,633,649 + SGL_RS09540 0.23 -1.5 1,633,652 - SGL_RS09540 0.23 -2.0 1,633,693 - SGL_RS09540 0.27 -1.6 1,633,706 - SGL_RS09540 0.29 -1.7 1,633,706 - SGL_RS09540 0.29 -1.7 1,633,777 + SGL_RS09540 0.36 -0.8 1,633,778 - SGL_RS09540 0.36 -1.7 1,633,860 + SGL_RS09540 0.44 -1.2 1,633,926 - SGL_RS09540 0.51 -0.9 1,633,941 + SGL_RS09540 0.52 -1.3 1,633,949 - SGL_RS09540 0.53 -0.6 1,633,949 - SGL_RS09540 0.53 -0.6 1,633,949 - SGL_RS09540 0.53 -0.5 1,633,954 - SGL_RS09540 0.54 -0.9 1,634,010 + SGL_RS09540 0.59 -1.5 1,634,029 + SGL_RS09540 0.61 -1.7 1,634,029 + SGL_RS09540 0.61 -0.1 1,634,029 + SGL_RS09540 0.61 -0.7 1,634,031 - SGL_RS09540 0.61 -1.0 1,634,037 - SGL_RS09540 0.62 -0.9 1,634,037 - SGL_RS09540 0.62 -0.3 1,634,122 + SGL_RS09540 0.70 -0.5 1,634,132 + SGL_RS09540 0.72 -0.1 1,634,134 + SGL_RS09540 0.72 +0.4 1,634,134 + SGL_RS09540 0.72 -0.0 1,634,142 - SGL_RS09540 0.73 -0.6 1,634,197 - SGL_RS09540 0.78 -0.7 1,634,243 - SGL_RS09540 0.83 -0.7 1,634,263 - SGL_RS09540 0.85 -0.5 1,634,509 - SGL_RS09545 0.15 +0.2 1,634,510 - SGL_RS09545 0.15 -0.1 1,634,538 + SGL_RS09545 0.20 -0.0 1,634,543 + SGL_RS09545 0.20 -0.4 1,634,546 - SGL_RS09545 0.21 +0.9 1,634,551 - SGL_RS09545 0.22 -0.1 1,634,618 + SGL_RS09545 0.32 -0.4 1,634,618 + SGL_RS09545 0.32 +0.1 1,634,644 - SGL_RS09545 0.36 +0.1 1,634,644 - SGL_RS09545 0.36 +0.6 1,634,668 - SGL_RS09545 0.40 -0.5 1,634,689 + SGL_RS09545 0.43 +0.0 1,634,715 - SGL_RS09545 0.47 +0.5 1,634,719 - SGL_RS09545 0.48 -0.2 1,634,865 + SGL_RS09545 0.70 -2.0 1,634,901 - SGL_RS09545 0.76 +0.3 1,634,927 - SGL_RS09545 0.80 -0.0 1,634,929 + SGL_RS09545 0.80 -0.2 1,634,950 + SGL_RS09545 0.83 -0.7 1,634,950 + SGL_RS09545 0.83 +0.1 1,635,095 + -1.3 1,635,116 - -1.4 1,635,180 + SGL_RS09550 0.16 -1.4 1,635,188 - SGL_RS09550 0.17 -1.3 1,635,197 - SGL_RS09550 0.18 -0.6 1,635,250 + SGL_RS09550 0.26 -1.6 1,635,258 + SGL_RS09550 0.27 -0.3 1,635,258 + SGL_RS09550 0.27 -1.2 1,635,281 + SGL_RS09550 0.31 -1.4 1,635,291 - SGL_RS09550 0.32 -1.2 1,635,312 + SGL_RS09550 0.35 -1.8 1,635,312 + SGL_RS09550 0.35 -1.5 1,635,312 + SGL_RS09550 0.35 -1.6 1,635,320 - SGL_RS09550 0.37 -1.4 1,635,338 + SGL_RS09550 0.39 -1.4 1,635,346 + SGL_RS09550 0.40 -2.3 1,635,494 + SGL_RS09550 0.62 +0.1 1,635,549 + SGL_RS09550 0.70 -0.6 1,635,782 + -0.8 1,635,789 + +0.5 1,635,790 - -0.1 1,635,797 - -0.5 1,635,797 - -0.9 1,635,985 + SGL_RS09555 0.25 -1.4
Or see this region's nucleotide sequence