Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03440 and SGL_RS03445 are separated by 17 nucleotides SGL_RS03445 and SGL_RS03450 are separated by 164 nucleotides SGL_RS03450 and SGL_RS03455 are separated by 100 nucleotides SGL_RS03455 and SGL_RS03460 are separated by 171 nucleotides
SGL_RS03440: SGL_RS03440 - PAM68 family protein, at 335,819 to 336,295
_RS03440
SGL_RS03445: SGL_RS03445 - 30S ribosomal protein S15, at 336,313 to 336,582
_RS03445
SGL_RS03450: SGL_RS03450 - permease, at 336,747 to 337,760
_RS03450
SGL_RS03455: SGL_RS03455 - tetratricopeptide repeat protein, at 337,861 to 338,331
_RS03455
SGL_RS03460: SGL_RS03460 - hypothetical protein, at 338,503 to 339,063
_RS03460
Position (kb) 336
337
338 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 335.837 kb on - strand at 335.837 kb on - strand at 335.842 kb on - strand at 335.906 kb on + strand, within SGL_RS03440 at 335.914 kb on - strand, within SGL_RS03440 at 335.914 kb on - strand, within SGL_RS03440 at 335.965 kb on - strand, within SGL_RS03440 at 335.992 kb on + strand, within SGL_RS03440 at 336.101 kb on - strand, within SGL_RS03440 at 336.106 kb on - strand, within SGL_RS03440 at 336.704 kb on + strand at 336.842 kb on + strand at 336.850 kb on - strand, within SGL_RS03450 at 337.389 kb on - strand, within SGL_RS03450 at 337.410 kb on - strand, within SGL_RS03450 at 337.415 kb on - strand, within SGL_RS03450 at 337.931 kb on + strand, within SGL_RS03455 at 337.933 kb on + strand, within SGL_RS03455 at 338.162 kb on - strand, within SGL_RS03455 at 338.162 kb on - strand, within SGL_RS03455 at 338.162 kb on - strand, within SGL_RS03455 at 338.225 kb on + strand, within SGL_RS03455 at 338.225 kb on + strand, within SGL_RS03455 at 338.239 kb on - strand, within SGL_RS03455 at 338.428 kb on + strand at 338.618 kb on - strand, within SGL_RS03460 at 338.679 kb on + strand, within SGL_RS03460 at 338.724 kb on + strand, within SGL_RS03460
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth remove 335,837 - +0.2 335,837 - +0.2 335,842 - +1.4 335,906 + SGL_RS03440 0.18 +0.3 335,914 - SGL_RS03440 0.20 +0.5 335,914 - SGL_RS03440 0.20 +0.9 335,965 - SGL_RS03440 0.31 +0.2 335,992 + SGL_RS03440 0.36 +0.6 336,101 - SGL_RS03440 0.59 +0.1 336,106 - SGL_RS03440 0.60 +1.5 336,704 + -0.6 336,842 + -2.2 336,850 - SGL_RS03450 0.10 -3.1 337,389 - SGL_RS03450 0.63 -4.0 337,410 - SGL_RS03450 0.65 -2.1 337,415 - SGL_RS03450 0.66 -2.3 337,931 + SGL_RS03455 0.15 -0.3 337,933 + SGL_RS03455 0.15 -1.2 338,162 - SGL_RS03455 0.64 -0.5 338,162 - SGL_RS03455 0.64 -0.5 338,162 - SGL_RS03455 0.64 +0.0 338,225 + SGL_RS03455 0.77 -0.7 338,225 + SGL_RS03455 0.77 -0.6 338,239 - SGL_RS03455 0.80 -1.1 338,428 + -0.4 338,618 - SGL_RS03460 0.20 -0.4 338,679 + SGL_RS03460 0.31 -0.6 338,724 + SGL_RS03460 0.39 -0.2
Or see this region's nucleotide sequence