Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS02785

Experiment: growth in full media and 10 mM glucose= photoheterotrophic growth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS02780 and SGL_RS02785 are separated by 3 nucleotidesSGL_RS02785 and SGL_RS02790 are separated by 75 nucleotidesSGL_RS02790 and SGL_RS02795 are separated by 67 nucleotides SGL_RS02780: SGL_RS02780 - dihydrolipoyl dehydrogenase, at 192,882 to 194,306 _RS02780 SGL_RS02785: SGL_RS02785 - CRR6 family NdhI maturation factor, at 194,310 to 194,801 _RS02785 SGL_RS02790: SGL_RS02790 - HEAT repeat domain-containing protein, at 194,877 to 195,617 _RS02790 SGL_RS02795: SGL_RS02795 - flavin prenyltransferase UbiX, at 195,685 to 196,305 _RS02795 Position (kb) 194 195Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 194.294 kb on - strandat 194.309 kb on - strandat 194.309 kb on - strandat 194.355 kb on - strandat 194.421 kb on + strand, within SGL_RS02785at 194.445 kb on - strand, within SGL_RS02785at 194.667 kb on - strand, within SGL_RS02785at 194.735 kb on - strand, within SGL_RS02785at 194.757 kb on + strandat 194.817 kb on + strandat 194.830 kb on - strandat 194.830 kb on - strandat 195.096 kb on + strand, within SGL_RS02790at 195.215 kb on - strand, within SGL_RS02790at 195.220 kb on - strand, within SGL_RS02790at 195.255 kb on + strand, within SGL_RS02790

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media and 10 mM glucose= photoheterotrophic growth
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194,294 - -3.3
194,309 - -0.4
194,309 - -0.1
194,355 - -1.3
194,421 + SGL_RS02785 0.23 -5.6
194,445 - SGL_RS02785 0.27 -2.6
194,667 - SGL_RS02785 0.73 -3.8
194,735 - SGL_RS02785 0.86 -4.8
194,757 + -1.9
194,817 + -0.0
194,830 - +0.3
194,830 - +0.1
195,096 + SGL_RS02790 0.30 +0.2
195,215 - SGL_RS02790 0.46 -0.3
195,220 - SGL_RS02790 0.46 -1.3
195,255 + SGL_RS02790 0.51 -1.3

Or see this region's nucleotide sequence