Experiment: ClNH4 10 mM as N source, buffered with 20 mM TES pH8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08915 and SGL_RS08920 are separated by 221 nucleotides SGL_RS08920 and SGL_RS08925 are separated by 42 nucleotides SGL_RS08925 and SGL_RS08930 are separated by 50 nucleotides SGL_RS08930 and SGL_RS08935 are separated by 38 nucleotides
SGL_RS08915: SGL_RS08915 - SpoIID/LytB domain-containing protein, at 1,508,482 to 1,509,768
_RS08915
SGL_RS08920: SGL_RS08920 - NAD(P)H-quinone oxidoreductase subunit H, at 1,509,990 to 1,511,174
_RS08920
SGL_RS08925: SGL_RS08925 - hypothetical protein, at 1,511,217 to 1,511,621
_RS08925
SGL_RS08930: SGL_RS08930 - hypothetical protein, at 1,511,672 to 1,511,977
_RS08930
SGL_RS08935: SGL_RS08935 - YheT family hydrolase, at 1,512,016 to 1,513,125
_RS08935
Position (kb) 1509
1510
1511
1512 Strain fitness (log2 ratio) -1
0
1 at 1509.053 kb on + strand, within SGL_RS08915 at 1509.098 kb on - strand, within SGL_RS08915 at 1509.106 kb on + strand, within SGL_RS08915 at 1509.106 kb on + strand, within SGL_RS08915 at 1509.106 kb on + strand, within SGL_RS08915 at 1509.113 kb on - strand, within SGL_RS08915 at 1509.141 kb on - strand, within SGL_RS08915 at 1509.217 kb on - strand, within SGL_RS08915 at 1509.217 kb on - strand, within SGL_RS08915 at 1509.262 kb on + strand, within SGL_RS08915 at 1509.318 kb on + strand, within SGL_RS08915 at 1509.378 kb on + strand, within SGL_RS08915 at 1509.599 kb on + strand, within SGL_RS08915 at 1509.625 kb on - strand, within SGL_RS08915 at 1509.809 kb on - strand at 1511.358 kb on + strand, within SGL_RS08925 at 1511.366 kb on - strand, within SGL_RS08925 at 1511.457 kb on - strand, within SGL_RS08925 at 1511.700 kb on + strand at 1511.713 kb on - strand, within SGL_RS08930 at 1511.837 kb on - strand, within SGL_RS08930 at 1511.883 kb on - strand, within SGL_RS08930 at 1511.906 kb on + strand, within SGL_RS08930 at 1511.908 kb on + strand, within SGL_RS08930 at 1511.914 kb on - strand, within SGL_RS08930 at 1511.989 kb on + strand at 1512.002 kb on - strand at 1512.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ClNH4 10 mM as N source, buffered with 20 mM TES pH8 remove 1,509,053 + SGL_RS08915 0.44 -0.1 1,509,098 - SGL_RS08915 0.48 -0.2 1,509,106 + SGL_RS08915 0.48 -0.2 1,509,106 + SGL_RS08915 0.48 +0.0 1,509,106 + SGL_RS08915 0.48 -0.4 1,509,113 - SGL_RS08915 0.49 -0.4 1,509,141 - SGL_RS08915 0.51 -0.4 1,509,217 - SGL_RS08915 0.57 +1.2 1,509,217 - SGL_RS08915 0.57 -0.5 1,509,262 + SGL_RS08915 0.61 +0.0 1,509,318 + SGL_RS08915 0.65 -0.2 1,509,378 + SGL_RS08915 0.70 -0.0 1,509,599 + SGL_RS08915 0.87 -0.3 1,509,625 - SGL_RS08915 0.89 +0.2 1,509,809 - -0.1 1,511,358 + SGL_RS08925 0.35 -0.1 1,511,366 - SGL_RS08925 0.37 +0.1 1,511,457 - SGL_RS08925 0.59 -0.3 1,511,700 + -0.1 1,511,713 - SGL_RS08930 0.13 +1.0 1,511,837 - SGL_RS08930 0.54 +0.4 1,511,883 - SGL_RS08930 0.69 -0.2 1,511,906 + SGL_RS08930 0.76 -0.1 1,511,908 + SGL_RS08930 0.77 +0.1 1,511,914 - SGL_RS08930 0.79 -0.6 1,511,989 + -0.2 1,512,002 - -0.1 1,512,107 - -0.2
Or see this region's nucleotide sequence