Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25340

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
6,158,444	+				+0.2
6,158,456	+				+1.1
6,158,510	+				+0.5
6,158,511	-				+0.2
6,158,512	+				-1.0
6,158,579	+		CA265_RS25330	0.14	-0.5
6,158,775	-		CA265_RS25330	0.56	-0.8
6,158,816	+		CA265_RS25330	0.65	+0.3
6,158,901	-		CA265_RS25330	0.84	-0.4
6,159,007	+				-0.4
6,159,055	+				-0.5
6,159,170	+				-0.0
6,159,170	+				-0.7
6,159,170	+				-0.7
6,159,170	+				+0.7
6,159,171	-				+0.2
6,159,200	+		CA265_RS25335	0.12	-1.0
6,159,445	+				-0.8
6,159,460	+				-0.6
6,159,470	-				-0.3
6,159,483	+				-0.4
6,159,484	-				+1.0
6,159,577	-				-1.4
6,159,697	+		CA265_RS25340	0.18	+0.3
6,159,716	+		CA265_RS25340	0.20	-0.6
6,159,717	-		CA265_RS25340	0.20	-1.2
6,159,737	-		CA265_RS25340	0.21	-2.2
6,159,780	+		CA265_RS25340	0.24	-1.4
6,159,780	+		CA265_RS25340	0.24	-0.0
6,159,802	+		CA265_RS25340	0.26	-1.2
6,159,807	+		CA265_RS25340	0.26	-0.6
6,159,839	-		CA265_RS25340	0.28	-0.6
6,159,888	+		CA265_RS25340	0.32	-0.1
6,159,962	-		CA265_RS25340	0.37	-0.6
6,159,975	-		CA265_RS25340	0.38	-1.5
6,159,975	-		CA265_RS25340	0.38	-0.9
6,159,994	+		CA265_RS25340	0.39	-0.2
6,160,019	-		CA265_RS25340	0.41	+0.5
6,160,022	+		CA265_RS25340	0.41	-1.0
6,160,023	-		CA265_RS25340	0.41	+0.2
6,160,030	-		CA265_RS25340	0.42	-1.4
6,160,036	+		CA265_RS25340	0.42	-0.5
6,160,078	-		CA265_RS25340	0.45	+0.1
6,160,078	-		CA265_RS25340	0.45	-0.9
6,160,097	-		CA265_RS25340	0.46	-0.9
6,160,217	-		CA265_RS25340	0.55	-0.7
6,160,217	-		CA265_RS25340	0.55	+1.0
6,160,368	+		CA265_RS25340	0.66	-1.2
6,160,373	-		CA265_RS25340	0.66	-0.8
6,160,419	-		CA265_RS25340	0.69	-1.0
6,160,427	+		CA265_RS25340	0.70	-0.4
6,160,429	+		CA265_RS25340	0.70	+1.3
6,160,429	+		CA265_RS25340	0.70	-1.1
6,160,493	+		CA265_RS25340	0.75	-2.4
6,160,497	+		CA265_RS25340	0.75	-0.5
6,160,498	-		CA265_RS25340	0.75	-0.6
6,160,508	-		CA265_RS25340	0.76	-0.6
6,160,536	+		CA265_RS25340	0.78	+0.3
6,160,549	+		CA265_RS25340	0.78	-2.5
6,160,553	-		CA265_RS25340	0.79	-0.4
6,160,563	-		CA265_RS25340	0.79	-2.2
6,160,574	-		CA265_RS25340	0.80	-0.9
6,160,710	-		CA265_RS25340	0.90	+0.8
6,160,720	+				+0.4
6,160,721	-				+0.3
6,160,766	+				+0.1
6,160,792	-				-0.9
6,160,831	-				-0.6
6,160,864	+				+0.2
6,160,870	+				+0.1
6,160,870	+				+0.3
6,160,871	-				+1.2
6,160,929	+				+0.4
6,161,153	+		CA265_RS25345	0.52	-0.5
6,161,182	+		CA265_RS25345	0.59	+0.9
6,161,183	-		CA265_RS25345	0.59	-1.0
6,161,183	-		CA265_RS25345	0.59	-1.5
6,161,193	-		CA265_RS25345	0.62	+0.2
6,161,325	+				+0.1
6,161,414	+				+0.3
6,161,456	-				-0.1
6,161,456	-				-0.3
6,161,470	+				-1.0
6,161,532	-		CA265_RS25350	0.12	+0.2
6,161,586	+		CA265_RS25350	0.16	-0.6
6,161,588	+		CA265_RS25350	0.16	-1.5
6,161,589	-		CA265_RS25350	0.16	-0.9
6,161,599	-		CA265_RS25350	0.17	+0.4
6,161,627	-		CA265_RS25350	0.19	+0.3
6,161,672	-		CA265_RS25350	0.23	-2.0
6,161,672	-		CA265_RS25350	0.23	-1.5
6,161,672	-		CA265_RS25350	0.23	+0.2
6,161,674	+		CA265_RS25350	0.23	-0.5
6,161,730	-		CA265_RS25350	0.27	-1.2
6,161,740	+		CA265_RS25350	0.28	+0.8
6,161,789	-		CA265_RS25350	0.32	-1.2
6,161,809	-		CA265_RS25350	0.33	+0.1
6,161,830	+		CA265_RS25350	0.35	-0.9
6,161,838	-		CA265_RS25350	0.35	-0.9
6,161,838	-		CA265_RS25350	0.35	-0.2