Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22825

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
5,583,555	+		CA265_RS22820	0.47	-2.6
5,583,561	-		CA265_RS22820	0.47	-0.8
5,583,619	+		CA265_RS22820	0.52	-3.4
5,583,635	+		CA265_RS22820	0.53	-0.8
5,583,710	-		CA265_RS22820	0.58	-1.0
5,583,712	+		CA265_RS22820	0.59	-1.4
5,583,716	+		CA265_RS22820	0.59	-2.0
5,583,815	-		CA265_RS22820	0.66	-2.4
5,583,872	-		CA265_RS22820	0.71	-1.7
5,583,935	-		CA265_RS22820	0.75	-3.5
5,584,012	+		CA265_RS22820	0.81	-2.5
5,584,017	+		CA265_RS22820	0.81	-1.1
5,584,094	-		CA265_RS22820	0.87	-0.8
5,584,094	-		CA265_RS22820	0.87	-3.3
5,584,108	+		CA265_RS22820	0.88	-0.8
5,584,141	-				-1.8
5,584,174	+				-1.4
5,584,175	-				-0.8
5,584,175	-				-1.9
5,584,175	-				-0.0
5,584,175	-				-1.5
5,584,177	+				-0.0
5,584,177	+				-1.1
5,584,183	+				-0.5
5,584,183	+				-1.4
5,584,210	+				-0.0
5,584,211	-				-2.5
5,584,266	-				-0.7
5,584,269	-				-3.0
5,584,278	+				-1.8
5,584,318	+				-0.4
5,584,353	+				-1.1
5,584,368	+				+0.4
5,584,369	-				-0.6
5,584,391	+				+0.1
5,584,403	+				-0.3
5,584,467	-				-3.5
5,584,501	-				-2.5
5,584,525	-				-3.6
5,584,561	+		CA265_RS22825	0.13	+0.3
5,584,564	-		CA265_RS22825	0.13	-1.8
5,584,574	+		CA265_RS22825	0.16	+0.0
5,584,599	-		CA265_RS22825	0.23	-1.8
5,584,618	-		CA265_RS22825	0.28	-0.1
5,584,637	+		CA265_RS22825	0.33	-0.8
5,584,648	-		CA265_RS22825	0.35	-1.7
5,584,862	+				-0.0
5,584,863	-				-1.4
5,584,874	+				+1.0
5,584,886	+				+0.6
5,584,887	-				+1.3
5,584,942	-				-1.0
5,584,945	+				-0.0
5,584,946	-				-0.3
5,584,981	+				-0.0
5,585,013	+		CA265_RS22830	0.13	+0.3
5,585,014	-		CA265_RS22830	0.13	-1.5
5,585,096	-		CA265_RS22830	0.22	-1.1
5,585,098	+		CA265_RS22830	0.22	+0.3
5,585,191	-		CA265_RS22830	0.33	+0.1
5,585,201	+		CA265_RS22830	0.34	+0.7
5,585,271	-		CA265_RS22830	0.42	-1.2
5,585,291	-		CA265_RS22830	0.44	-2.1
5,585,307	-		CA265_RS22830	0.46	-0.3
5,585,327	+		CA265_RS22830	0.48	+0.1
5,585,329	+		CA265_RS22830	0.48	-0.8
5,585,341	+		CA265_RS22830	0.49	-0.6
5,585,342	-		CA265_RS22830	0.49	-1.0
5,585,405	-		CA265_RS22830	0.56	+0.6
5,585,406	+		CA265_RS22830	0.56	+1.1
5,585,406	+		CA265_RS22830	0.56	-1.0
5,585,406	+		CA265_RS22830	0.56	-2.4
5,585,407	-		CA265_RS22830	0.57	-0.3
5,585,407	-		CA265_RS22830	0.57	-1.9
5,585,407	-		CA265_RS22830	0.57	+1.3
5,585,437	+		CA265_RS22830	0.60	+0.9
5,585,549	+		CA265_RS22830	0.72	+0.7
5,585,552	-		CA265_RS22830	0.73	+1.1
5,585,594	-		CA265_RS22830	0.77	-1.0
5,585,669	+		CA265_RS22830	0.86	-0.3
5,585,670	-		CA265_RS22830	0.86	-1.0
5,585,771	-				+2.3
5,585,821	+				-0.7
5,585,821	+				-0.5
5,585,826	-				-0.5
5,585,826	-				-1.4