Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19440

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,824,698	+		CA265_RS19435	0.60	-0.6
4,824,809	+		CA265_RS19435	0.64	-0.5
4,824,810	-		CA265_RS19435	0.64	-1.2
4,824,819	+		CA265_RS19435	0.65	-0.4
4,824,820	-		CA265_RS19435	0.65	+0.3
4,824,828	-		CA265_RS19435	0.65	-0.9
4,824,847	+		CA265_RS19435	0.66	-0.6
4,824,854	+		CA265_RS19435	0.66	-1.4
4,824,855	-		CA265_RS19435	0.66	+0.0
4,824,941	+		CA265_RS19435	0.70	+0.7
4,824,982	+		CA265_RS19435	0.72	+0.7
4,824,984	+		CA265_RS19435	0.72	+0.2
4,824,984	+		CA265_RS19435	0.72	-1.2
4,824,984	+		CA265_RS19435	0.72	-0.3
4,824,984	+		CA265_RS19435	0.72	+0.4
4,825,025	-		CA265_RS19435	0.74	-0.6
4,825,052	-		CA265_RS19435	0.75	-0.1
4,825,068	+		CA265_RS19435	0.75	-0.2
4,825,069	-		CA265_RS19435	0.75	-0.5
4,825,180	+		CA265_RS19435	0.80	-1.3
4,825,186	-		CA265_RS19435	0.80	+0.7
4,825,220	+		CA265_RS19435	0.82	-0.1
4,825,221	-		CA265_RS19435	0.82	-1.0
4,825,224	+		CA265_RS19435	0.82	-0.2
4,825,232	-		CA265_RS19435	0.82	-1.1
4,825,254	+		CA265_RS19435	0.83	-1.1
4,825,255	-		CA265_RS19435	0.83	-0.8
4,825,323	-		CA265_RS19435	0.86	+0.4
4,825,331	+		CA265_RS19435	0.86	+1.0
4,825,332	-		CA265_RS19435	0.86	-1.3
4,825,364	-		CA265_RS19435	0.88	-0.3
4,825,391	+		CA265_RS19435	0.89	+0.1
4,825,392	-		CA265_RS19435	0.89	-1.3
4,825,393	+		CA265_RS19435	0.89	+0.1
4,825,393	+		CA265_RS19435	0.89	-1.1
4,825,394	-		CA265_RS19435	0.89	+1.3
4,825,448	+				-0.4
4,825,506	-				+1.6
4,825,518	-				-1.4
4,825,539	+				-0.1
4,825,540	-				+0.4
4,825,540	-				+0.2
4,825,540	-				-0.8
4,825,598	+				+0.1
4,825,646	+				-1.5
4,825,656	-				-0.0
4,825,695	-				-0.1
4,825,705	+				-0.5
4,825,759	-		CA265_RS19440	0.16	-0.2
4,825,827	-		CA265_RS19440	0.28	+0.2
4,825,841	+		CA265_RS19440	0.30	-0.6
4,825,912	+		CA265_RS19440	0.42	+1.4
4,825,938	+		CA265_RS19440	0.47	+8.2
4,826,036	-		CA265_RS19440	0.64	-0.2
4,826,036	-		CA265_RS19440	0.64	+0.4
4,826,036	-		CA265_RS19440	0.64	-1.8
4,826,073	-		CA265_RS19440	0.70	+0.2
4,826,114	-		CA265_RS19440	0.77	+0.5
4,826,114	-		CA265_RS19440	0.77	+0.1
4,826,118	-		CA265_RS19440	0.78	+0.1
4,826,142	+		CA265_RS19440	0.82	-0.6
4,826,142	+		CA265_RS19440	0.82	+0.1
4,826,146	+		CA265_RS19440	0.82	-0.5
4,826,146	+		CA265_RS19440	0.82	+0.1
4,826,198	-				-2.0
4,826,198	-				-0.4
4,826,253	-				+1.6
4,826,256	-				-0.4
4,826,261	-				-1.2
4,826,344	-				+0.5
4,826,408	+				+0.4
4,826,449	-				-1.4
4,826,479	-				-0.3
4,826,490	-				-0.8
4,826,575	+		CA265_RS19445	0.11	+1.7
4,826,623	-		CA265_RS19445	0.18	+0.3
4,826,689	+		CA265_RS19445	0.28	-0.6
4,826,690	-		CA265_RS19445	0.29	-0.6
4,826,750	-		CA265_RS19445	0.38	-0.0
4,826,759	+		CA265_RS19445	0.39	+0.1
4,826,775	+		CA265_RS19445	0.41	-0.6
4,826,812	+		CA265_RS19445	0.47	+0.5
4,826,843	+		CA265_RS19445	0.52	+1.9
4,826,874	+		CA265_RS19445	0.56	+0.1
4,826,874	+		CA265_RS19445	0.56	-1.9
4,826,875	-		CA265_RS19445	0.56	-0.3
4,826,875	-		CA265_RS19445	0.56	-0.4
4,827,003	-		CA265_RS19445	0.76	-0.9
4,827,046	-		CA265_RS19445	0.82	-0.7
4,827,052	-		CA265_RS19445	0.83	-0.4
4,827,122	+				+0.2
4,827,146	+				-0.4
4,827,151	-				-0.1
4,827,164	-				-0.6
4,827,164	-				-0.7
4,827,218	-				-0.2
4,827,223	-				-0.5
4,827,235	-				-0.9