Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14420

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,635,777	+		CA265_RS14415	0.15	+0.6
3,635,778	-		CA265_RS14415	0.15	+0.9
3,635,778	-		CA265_RS14415	0.15	+0.8
3,635,826	-		CA265_RS14415	0.20	+0.5
3,635,836	+		CA265_RS14415	0.21	+0.7
3,635,930	+		CA265_RS14415	0.30	+1.5
3,635,953	-		CA265_RS14415	0.32	+0.6
3,635,958	-		CA265_RS14415	0.33	+1.1
3,635,959	+		CA265_RS14415	0.33	+0.3
3,635,959	+		CA265_RS14415	0.33	+2.5
3,636,041	-		CA265_RS14415	0.41	+0.9
3,636,089	+		CA265_RS14415	0.45	+1.1
3,636,090	-		CA265_RS14415	0.45	+1.0
3,636,090	-		CA265_RS14415	0.45	+1.3
3,636,091	+		CA265_RS14415	0.46	+1.0
3,636,091	+		CA265_RS14415	0.46	+2.3
3,636,186	-		CA265_RS14415	0.55	+1.3
3,636,266	+		CA265_RS14415	0.63	+1.1
3,636,283	+		CA265_RS14415	0.64	+1.1
3,636,304	-		CA265_RS14415	0.66	+1.5
3,636,304	-		CA265_RS14415	0.66	+0.9
3,636,304	-		CA265_RS14415	0.66	+1.4
3,636,328	-		CA265_RS14415	0.69	+1.5
3,636,360	-		CA265_RS14415	0.72	+1.0
3,636,370	-		CA265_RS14415	0.73	+0.9
3,636,434	-		CA265_RS14415	0.79	+1.1
3,636,882	-		CA265_RS14420	0.12	+1.2
3,636,889	+		CA265_RS14420	0.13	+1.2
3,637,035	-		CA265_RS14420	0.27	-0.1
3,637,050	-		CA265_RS14420	0.29	-1.1
3,637,059	+		CA265_RS14420	0.30	+1.1
3,637,059	+		CA265_RS14420	0.30	-0.9
3,637,155	+		CA265_RS14420	0.39	-0.0
3,637,187	+		CA265_RS14420	0.42	+0.1
3,637,235	+		CA265_RS14420	0.47	-0.0
3,637,240	-		CA265_RS14420	0.47	-0.1
3,637,254	+		CA265_RS14420	0.49	-1.6
3,637,304	+		CA265_RS14420	0.53	+1.2
3,637,305	-		CA265_RS14420	0.54	-0.0
3,637,362	+		CA265_RS14420	0.59	-0.1
3,637,395	-		CA265_RS14420	0.62	-0.6
3,637,421	-		CA265_RS14420	0.65	-0.6
3,637,443	+		CA265_RS14420	0.67	-0.7
3,637,624	+		CA265_RS14420	0.85	-1.7
3,637,624	+		CA265_RS14420	0.85	-0.3
3,637,624	+		CA265_RS14420	0.85	+0.4
3,637,625	-		CA265_RS14420	0.85	-0.2
3,637,680	-				-0.2
3,637,723	+				+0.5
3,637,724	-				-1.4
3,637,726	-				+0.6
3,637,744	-				+0.3
3,637,744	-				+1.2
3,637,789	+				+0.8
3,637,798	-				+0.3
3,637,800	+				+1.9
3,637,801	-				+0.6
3,637,809	-				-1.4
3,637,812	-				+0.1
3,637,939	-				-1.5
3,637,942	+				+0.2
3,638,018	-		CA265_RS14425	0.11	-0.5
3,638,048	+		CA265_RS14425	0.14	-1.5
3,638,124	+		CA265_RS14425	0.23	+0.1
3,638,146	+		CA265_RS14425	0.25	-0.6
3,638,203	-		CA265_RS14425	0.32	-0.8
3,638,203	-		CA265_RS14425	0.32	+0.2
3,638,318	-		CA265_RS14425	0.45	-0.3
3,638,391	-		CA265_RS14425	0.54	+0.8
3,638,392	-		CA265_RS14425	0.54	+0.5
3,638,439	+		CA265_RS14425	0.59	-0.3
3,638,483	-		CA265_RS14425	0.64	-0.7
3,638,487	+		CA265_RS14425	0.65	+0.3
3,638,494	-		CA265_RS14425	0.65	-0.2
3,638,526	+		CA265_RS14425	0.69	-1.0
3,638,526	+		CA265_RS14425	0.69	-2.8
3,638,530	+		CA265_RS14425	0.70	-0.5
3,638,531	-		CA265_RS14425	0.70	-0.3
3,638,534	+		CA265_RS14425	0.70	-0.2
3,638,632	+		CA265_RS14425	0.81	-1.2
3,638,632	+		CA265_RS14425	0.81	-0.6
3,638,633	-		CA265_RS14425	0.81	+0.3
3,638,633	-		CA265_RS14425	0.81	+0.2
3,638,717	-				-0.5
3,638,769	+				+0.6