Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13610

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,400,934	+		CA265_RS13605	0.52	-0.5
3,400,934	+		CA265_RS13605	0.52	-0.7
3,400,945	+		CA265_RS13605	0.52	-0.4
3,400,945	+		CA265_RS13605	0.52	-0.4
3,400,994	-		CA265_RS13605	0.55	+1.5
3,401,042	-		CA265_RS13605	0.58	+0.4
3,401,069	-		CA265_RS13605	0.60	+0.5
3,401,124	+		CA265_RS13605	0.63	+0.1
3,401,142	+		CA265_RS13605	0.65	-0.8
3,401,142	+		CA265_RS13605	0.65	-0.7
3,401,143	-		CA265_RS13605	0.65	+1.2
3,401,144	+		CA265_RS13605	0.65	-0.7
3,401,144	+		CA265_RS13605	0.65	+0.1
3,401,144	+		CA265_RS13605	0.65	-0.5
3,401,145	-		CA265_RS13605	0.65	+0.0
3,401,146	+		CA265_RS13605	0.65	+1.0
3,401,230	-		CA265_RS13605	0.70	-0.2
3,401,263	-		CA265_RS13605	0.72	+0.5
3,401,265	-		CA265_RS13605	0.72	+0.5
3,401,344	-				+2.0
3,401,347	+		CA265_RS13605	0.77	+0.1
3,401,351	+		CA265_RS13605	0.78	+0.6
3,401,382	+		CA265_RS13605	0.80	+1.2
3,401,383	-		CA265_RS13605	0.80	+0.6
3,401,383	-		CA265_RS13605	0.80	+0.7
3,401,722	+				+0.4
3,401,722	+				-0.4
3,401,724	+				+0.5
3,401,725	-				+1.2
3,401,727	-				+0.2
3,401,756	+				+1.1
3,401,756	+				+0.1
3,401,758	+				+0.1
3,401,759	-				+1.9
3,401,768	+				-0.3
3,401,813	+				+0.1
3,401,831	+				+0.5
3,401,831	+				-0.2
3,401,834	-				-0.3
3,401,852	-				+0.7
3,401,953	+				+0.2
3,401,953	+				+0.1
3,401,954	-				+0.7
3,401,986	+		CA265_RS13610	0.14	-0.5
3,401,986	+		CA265_RS13610	0.14	+0.0
3,401,986	+		CA265_RS13610	0.14	+0.7
3,401,987	-		CA265_RS13610	0.14	-0.1
3,401,987	-		CA265_RS13610	0.14	-0.5
3,401,987	-		CA265_RS13610	0.14	-1.0
3,401,987	-		CA265_RS13610	0.14	-0.1
3,402,030	+		CA265_RS13610	0.22	+1.0
3,402,031	-		CA265_RS13610	0.22	-0.5
3,402,229	+		CA265_RS13610	0.58	-0.3
3,402,252	+		CA265_RS13610	0.62	+0.7
3,402,253	-		CA265_RS13610	0.62	-0.3
3,402,253	-		CA265_RS13610	0.62	-1.9
3,402,258	+		CA265_RS13610	0.63	+2.9
3,402,258	+		CA265_RS13610	0.63	-0.2
3,402,280	-		CA265_RS13610	0.67	-0.5
3,402,343	-		CA265_RS13610	0.79	-0.3
3,402,436	+				-0.2
3,402,438	+				-0.9
3,402,438	+				-0.9
3,402,439	-				+0.2
3,402,440	+				-1.1
3,402,440	+				-0.4
3,402,454	+				-0.9
3,402,468	-				-0.3
3,402,468	-				+0.1
3,402,479	-				-0.6
3,402,504	+				-0.2
3,402,518	-				+0.7
3,402,518	-				+0.5
3,402,589	+				+0.2
3,402,590	-				-1.3
3,402,590	-				-0.0
3,402,649	-				-0.4
3,402,748	+				-1.1
3,402,749	-				-0.2
3,402,751	+				-0.2
3,402,783	-		CA265_RS13615	0.12	-1.3
3,402,805	-		CA265_RS13615	0.14	+0.2
3,402,879	-		CA265_RS13615	0.20	-0.6
3,402,879	-		CA265_RS13615	0.20	-0.3
3,402,949	+		CA265_RS13615	0.26	+1.0
3,402,950	-		CA265_RS13615	0.26	-1.5
3,403,048	-		CA265_RS13615	0.35	-1.0
3,403,048	-		CA265_RS13615	0.35	-0.3
3,403,143	-		CA265_RS13615	0.43	+1.2
3,403,143	-		CA265_RS13615	0.43	-0.4
3,403,143	-		CA265_RS13615	0.43	+0.2
3,403,188	+		CA265_RS13615	0.46	-0.7
3,403,218	+		CA265_RS13615	0.49	-0.9
3,403,287	-		CA265_RS13615	0.55	-0.2
3,403,292	+		CA265_RS13615	0.55	+0.5
3,403,361	+		CA265_RS13615	0.61	-1.4
3,403,367	+		CA265_RS13615	0.62	-0.2
3,403,438	+		CA265_RS13615	0.68	-0.3
3,403,441	+		CA265_RS13615	0.68	+0.3
3,403,455	+		CA265_RS13615	0.69	+0.0
3,403,456	-		CA265_RS13615	0.69	+0.2