Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12820

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,194,666	+		CA265_RS12815	0.70	-0.8
3,194,682	+		CA265_RS12815	0.71	-0.1
3,194,796	-		CA265_RS12815	0.75	+0.3
3,194,802	-		CA265_RS12815	0.75	+0.3
3,194,805	-		CA265_RS12815	0.75	-0.2
3,194,816	+		CA265_RS12815	0.75	+0.1
3,194,816	+		CA265_RS12815	0.75	+1.6
3,194,817	-		CA265_RS12815	0.75	+0.6
3,194,884	+		CA265_RS12815	0.78	-0.0
3,194,991	+		CA265_RS12815	0.82	-0.4
3,195,032	+		CA265_RS12815	0.83	+0.7
3,195,092	+		CA265_RS12815	0.85	-0.4
3,195,115	-		CA265_RS12815	0.86	-0.0
3,195,210	+		CA265_RS12815	0.90	+0.2
3,195,268	-				+0.2
3,195,268	-				+0.6
3,195,269	+				-0.2
3,195,270	-				+0.6
3,195,290	+				-0.3
3,195,290	+				+0.2
3,195,293	+				-1.7
3,195,294	-				+0.6
3,195,313	+				+1.2
3,195,367	-				-0.5
3,195,387	+				-0.3
3,195,439	+				-0.8
3,195,439	+				-0.5
3,195,606	+				-1.1
3,195,627	+				+0.4
3,195,627	+				+0.1
3,195,627	+				-0.8
3,195,646	+				-0.2
3,195,723	-				+2.0
3,195,799	+		CA265_RS12820	0.16	-0.3
3,195,837	+		CA265_RS12820	0.21	-0.0
3,195,838	-		CA265_RS12820	0.21	+1.6
3,195,848	+		CA265_RS12820	0.22	-1.4
3,195,849	-		CA265_RS12820	0.22	+2.1
3,195,889	-		CA265_RS12820	0.27	+3.3
3,195,939	-		CA265_RS12820	0.33	+1.4
3,195,975	+		CA265_RS12820	0.37	+1.7
3,195,975	+		CA265_RS12820	0.37	-0.8
3,195,980	-		CA265_RS12820	0.38	+0.9
3,196,011	-		CA265_RS12820	0.41	+1.8
3,196,011	-		CA265_RS12820	0.41	+0.9
3,196,043	+		CA265_RS12820	0.45	+0.6
3,196,044	-		CA265_RS12820	0.45	+0.9
3,196,064	-				+2.1
3,196,106	-		CA265_RS12820	0.53	+2.2
3,196,145	-		CA265_RS12820	0.57	+1.5
3,196,145	-		CA265_RS12820	0.57	+1.4
3,196,153	-		CA265_RS12820	0.58	+1.3
3,196,172	-		CA265_RS12820	0.61	+1.7
3,196,227	-		CA265_RS12820	0.67	+1.7
3,196,311	-		CA265_RS12820	0.77	+1.8
3,196,423	+				-0.9
3,196,439	-				+0.7
3,196,493	+				-0.3
3,196,499	+				-0.1
3,196,524	+				+0.9
3,196,563	+				-0.1
3,196,595	-				+2.3
3,196,595	-				+1.1
3,196,595	-				+0.7
3,196,651	-				-0.3
3,196,703	+				-0.6
3,196,935	+				-0.6
3,196,935	+				-0.9
3,196,935	+				-1.5
3,196,936	-				+1.1
3,196,945	+				-1.4
3,196,945	+				-0.9
3,196,945	+				-0.1
3,197,051	-				+0.3
3,197,094	+		CA265_RS12825	0.10	-0.3
3,197,101	-		CA265_RS12825	0.12	+0.2
3,197,164	-		CA265_RS12825	0.26	+0.4
3,197,211	+		CA265_RS12825	0.36	-0.8
3,197,278	+		CA265_RS12825	0.52	-0.5
3,197,420	+		CA265_RS12825	0.84	-1.0
3,197,436	-		CA265_RS12825	0.87	+0.9
3,197,486	-				+0.7