Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07350

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,851,060	+				+0.7
1,851,166	-				+0.4
1,851,168	+				+0.4
1,851,235	-		CA265_RS07345	0.17	-0.7
1,851,344	+		CA265_RS07345	0.33	+0.4
1,851,344	+		CA265_RS07345	0.33	-1.0
1,851,392	+		CA265_RS07345	0.40	-1.1
1,851,467	+		CA265_RS07345	0.52	+0.4
1,851,467	+		CA265_RS07345	0.52	+0.7
1,851,471	+		CA265_RS07345	0.52	-0.3
1,851,584	-		CA265_RS07345	0.69	-0.4
1,851,587	+		CA265_RS07345	0.69	-0.1
1,851,634	-		CA265_RS07345	0.76	+0.1
1,851,696	-		CA265_RS07345	0.86	+0.7
1,851,718	-		CA265_RS07345	0.89	-0.3
1,851,784	-				+1.1
1,851,866	+				-0.8
1,852,094	+				-1.4
1,852,137	+				-0.2
1,852,137	+				-0.8
1,852,139	+		CA265_RS07350	0.10	-0.4
1,852,142	+		CA265_RS07350	0.10	+0.4
1,852,167	-		CA265_RS07350	0.13	+0.2
1,852,232	-		CA265_RS07350	0.19	+0.1
1,852,267	-		CA265_RS07350	0.22	-0.6
1,852,270	+		CA265_RS07350	0.22	+0.4
1,852,270	+		CA265_RS07350	0.22	-0.5
1,852,271	-		CA265_RS07350	0.22	-0.6
1,852,383	+		CA265_RS07350	0.33	+0.5
1,852,406	+		CA265_RS07350	0.35	+0.7
1,852,465	+		CA265_RS07350	0.40	-0.3
1,852,465	+		CA265_RS07350	0.40	-1.7
1,852,466	-		CA265_RS07350	0.40	+0.3
1,852,493	+		CA265_RS07350	0.43	-0.1
1,852,494	-		CA265_RS07350	0.43	-1.4
1,852,511	+		CA265_RS07350	0.45	-0.9
1,852,576	+		CA265_RS07350	0.51	-0.8
1,852,576	+		CA265_RS07350	0.51	-2.1
1,852,609	+		CA265_RS07350	0.54	+0.5
1,852,663	+		CA265_RS07350	0.59	+0.6
1,852,721	-		CA265_RS07350	0.64	+0.1
1,852,749	-		CA265_RS07350	0.66	-1.1
1,852,767	-		CA265_RS07350	0.68	-0.2
1,852,812	-		CA265_RS07350	0.72	-0.1
1,852,812	-		CA265_RS07350	0.72	-1.2
1,852,812	-		CA265_RS07350	0.72	-0.3
1,852,902	-		CA265_RS07350	0.81	-0.5
1,852,924	-		CA265_RS07350	0.83	-0.6
1,853,044	-				-1.1
1,853,057	+				-0.9
1,853,057	+				-1.3
1,853,057	+				+0.0
1,853,058	-				-0.5
1,853,094	-				-0.2
1,853,099	+				+1.2
1,853,100	-				-0.7
1,853,230	-				+0.7
1,853,230	-				+1.3
1,853,231	+				-0.1
1,853,231	+				+0.2
1,853,238	+				-0.1
1,853,354	-		CA265_RS07355	0.18	-0.0
1,853,374	-		CA265_RS07355	0.20	-0.8
1,853,478	+		CA265_RS07355	0.28	+1.9
1,853,523	+		CA265_RS07355	0.32	+0.5
1,853,524	-		CA265_RS07355	0.32	+2.2
1,853,524	-		CA265_RS07355	0.32	-0.1
1,853,558	-		CA265_RS07355	0.35	-0.1
1,853,569	-		CA265_RS07355	0.36	+0.2
1,853,648	+		CA265_RS07355	0.43	+2.7
1,853,655	-		CA265_RS07355	0.43	-0.4
1,853,659	-		CA265_RS07355	0.43	+0.4
1,853,822	+		CA265_RS07355	0.57	+0.8
1,853,865	+		CA265_RS07355	0.61	+0.7
1,853,895	-		CA265_RS07355	0.63	-1.4
1,853,946	+		CA265_RS07355	0.67	-0.4