Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07335

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,848,315	-				+1.6
1,848,365	+				-0.6
1,848,431	-				-1.5
1,848,447	+				+1.9
1,848,448	-				+0.0
1,848,453	-				+0.2
1,848,486	-				-0.2
1,848,531	+				-0.3
1,848,543	-				-1.2
1,848,546	+				+0.6
1,848,549	-				-1.6
1,848,555	-				+0.0
1,848,600	+				-0.9
1,848,721	+		CA265_RS07330	0.32	-1.3
1,848,722	-		CA265_RS07330	0.33	-0.2
1,848,722	-		CA265_RS07330	0.33	-0.6
1,848,868	-		CA265_RS07330	0.73	+0.4
1,848,875	-		CA265_RS07330	0.75	-0.8
1,848,934	+				+0.7
1,848,973	-				+0.3
1,848,990	+				-0.7
1,848,990	+				-0.0
1,848,991	-				+0.9
1,849,039	-				+0.6
1,849,071	+				-0.1
1,849,071	+				-0.5
1,849,078	-				+0.2
1,849,134	-				+0.2
1,849,145	-				+0.9
1,849,150	+				-0.2
1,849,171	+				-0.9
1,849,185	+				-0.0
1,849,220	-				+0.6
1,849,324	+		CA265_RS07335	0.26	-0.2
1,849,324	+		CA265_RS07335	0.26	+0.1
1,849,371	-		CA265_RS07335	0.38	-0.7
1,849,393	+		CA265_RS07335	0.43	-0.7
1,849,519	+		CA265_RS07335	0.75	+0.8
1,849,547	-		CA265_RS07335	0.82	+0.8
1,849,597	+				-0.6
1,849,613	+				-0.1
1,849,634	-				+0.5
1,849,637	+				+0.8
1,849,641	+				-0.8
1,849,757	+				-1.1
1,849,757	+				+0.2
1,849,758	-				+0.1
1,849,758	-				+0.4
1,849,770	+				-1.6
1,849,778	+				-0.4
1,849,792	-				+1.1
1,849,795	+				+0.1
1,849,796	-				+0.9
1,849,797	+				+0.2
1,849,821	-		CA265_RS07340	0.11	+0.4
1,849,889	+		CA265_RS07340	0.17	+0.2
1,849,890	-		CA265_RS07340	0.17	-0.5
1,849,920	-		CA265_RS07340	0.20	-0.2
1,850,196	-		CA265_RS07340	0.43	-1.2
1,850,202	-		CA265_RS07340	0.44	-0.5
1,850,274	-		CA265_RS07340	0.50	-1.8
1,850,296	-		CA265_RS07340	0.52	-0.4
1,850,299	+		CA265_RS07340	0.52	+0.4
1,850,299	+		CA265_RS07340	0.52	+0.4
1,850,300	-		CA265_RS07340	0.52	+0.2
1,850,422	-		CA265_RS07340	0.63	-0.2
1,850,464	-		CA265_RS07340	0.66	+1.0
1,850,464	-		CA265_RS07340	0.66	+0.4
1,850,464	-		CA265_RS07340	0.66	-0.0
1,850,532	+		CA265_RS07340	0.72	-0.1
1,850,533	-		CA265_RS07340	0.72	+0.6