Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06585

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,627,891	+		CA265_RS06580	0.48	+0.3
1,627,891	+		CA265_RS06580	0.48	-2.1
1,627,898	-		CA265_RS06580	0.49	-1.4
1,627,902	+		CA265_RS06580	0.49	+1.7
1,627,902	+		CA265_RS06580	0.49	-1.0
1,627,917	+		CA265_RS06580	0.50	-0.7
1,627,962	-		CA265_RS06580	0.53	-0.4
1,627,991	-		CA265_RS06580	0.54	-0.6
1,627,993	-		CA265_RS06580	0.55	+0.0
1,628,130	+		CA265_RS06580	0.63	-0.5
1,628,130	+		CA265_RS06580	0.63	-1.1
1,628,131	-		CA265_RS06580	0.63	+0.4
1,628,134	-		CA265_RS06580	0.63	-0.2
1,628,160	-		CA265_RS06580	0.65	+0.4
1,628,177	-		CA265_RS06580	0.66	+0.7
1,628,183	-		CA265_RS06580	0.66	-0.2
1,628,203	-		CA265_RS06580	0.67	+0.2
1,628,203	-		CA265_RS06580	0.67	-0.5
1,628,207	-		CA265_RS06580	0.67	-0.0
1,628,207	-		CA265_RS06580	0.67	-1.9
1,628,207	-		CA265_RS06580	0.67	+0.1
1,628,248	-		CA265_RS06580	0.70	+0.4
1,628,251	+		CA265_RS06580	0.70	+0.7
1,628,311	-		CA265_RS06580	0.74	+0.8
1,628,339	+		CA265_RS06580	0.75	-0.9
1,628,340	-		CA265_RS06580	0.75	-0.2
1,628,369	-		CA265_RS06580	0.77	+0.2
1,628,380	-		CA265_RS06580	0.78	+0.3
1,628,445	+		CA265_RS06580	0.82	-0.7
1,628,446	-		CA265_RS06580	0.82	+0.3
1,628,458	+		CA265_RS06580	0.82	-0.1
1,628,492	-		CA265_RS06580	0.85	+0.5
1,628,500	-		CA265_RS06580	0.85	+0.5
1,628,560	+		CA265_RS06580	0.89	-0.1
1,628,582	+				-0.3
1,628,647	-				+0.7
1,628,667	-				+1.0
1,628,727	+				-1.1
1,628,773	+				-0.5
1,628,774	-				+0.3
1,628,776	-				-0.3
1,628,822	-				-1.2
1,628,822	-				+0.6
1,628,932	+				+4.9
1,628,948	+		CA265_RS06585	0.11	+5.3
1,628,998	-		CA265_RS06585	0.17	+6.1
1,629,000	+		CA265_RS06585	0.17	+4.4
1,629,081	-		CA265_RS06585	0.26	+4.8
1,629,106	-		CA265_RS06585	0.29	+6.4
1,629,169	+		CA265_RS06585	0.36	+5.1
1,629,169	+		CA265_RS06585	0.36	+4.9
1,629,170	-		CA265_RS06585	0.36	+6.4
1,629,170	-		CA265_RS06585	0.36	+5.6
1,629,226	+		CA265_RS06585	0.42	+4.4
1,629,252	+		CA265_RS06585	0.45	+5.3
1,629,253	-		CA265_RS06585	0.45	+6.0
1,629,294	+		CA265_RS06585	0.50	+4.6
1,629,329	-		CA265_RS06585	0.54	+6.0
1,629,335	-		CA265_RS06585	0.54	+5.6
1,629,421	-		CA265_RS06585	0.64	+5.8
1,629,662	+				+4.7
1,629,800	+				-0.4
1,629,801	-				+0.6
1,629,883	+				-1.3
1,629,972	-		CA265_RS06590	0.16	+0.5
1,630,238	+		CA265_RS06590	0.39	-0.4
1,630,422	-		CA265_RS06590	0.54	-0.1
1,630,454	-		CA265_RS06590	0.57	+1.1
1,630,456	+		CA265_RS06590	0.57	-1.5
1,630,457	-		CA265_RS06590	0.57	-0.7
1,630,507	-		CA265_RS06590	0.62	+0.7
1,630,529	+		CA265_RS06590	0.64	-1.5
1,630,530	-		CA265_RS06590	0.64	-1.0
1,630,590	+		CA265_RS06590	0.69	-0.9
1,630,594	-		CA265_RS06590	0.69	-0.4
1,630,594	-		CA265_RS06590	0.69	-0.3
1,630,594	-		CA265_RS06590	0.69	+0.3
1,630,603	+		CA265_RS06590	0.70	+0.3
1,630,603	+		CA265_RS06590	0.70	+1.1
1,630,684	+		CA265_RS06590	0.77	+1.1
1,630,701	-		CA265_RS06590	0.78	-0.3
1,630,705	+		CA265_RS06590	0.78	+1.5
1,630,705	+		CA265_RS06590	0.78	-1.0