Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06335

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,555,745	+				-1.2
1,555,776	+				+0.5
1,555,810	-				+0.4
1,555,838	-				-2.3
1,555,882	+				-0.5
1,555,896	-				+0.2
1,555,936	-				-1.3
1,556,043	-		CA265_RS06335	0.23	+1.4
1,556,210	+		CA265_RS06335	0.58	-0.2
1,556,239	+		CA265_RS06335	0.64	+0.8
1,556,240	-		CA265_RS06335	0.65	+0.8
1,556,245	+		CA265_RS06335	0.66	+0.6
1,556,266	+		CA265_RS06335	0.70	-0.5
1,556,266	+		CA265_RS06335	0.70	+0.0
1,556,266	+		CA265_RS06335	0.70	-0.6
1,556,297	-		CA265_RS06335	0.77	+1.0
1,556,297	-		CA265_RS06335	0.77	+0.3
1,556,312	-		CA265_RS06335	0.80	-0.8
1,556,312	-		CA265_RS06335	0.80	-0.3
1,556,349	-		CA265_RS06335	0.88	-0.9
1,556,422	-				-0.4
1,556,422	-				+0.6
1,556,432	-				+0.3
1,556,471	-				-0.5
1,556,514	+				+1.0
1,556,515	-				-0.9
1,556,520	+				-0.2
1,556,651	-				-0.9
1,556,651	-				+1.0
1,556,651	-				+0.1
1,556,656	-				-1.2
1,556,741	-				-0.4
1,556,793	+				-0.9
1,556,803	+				+0.3
1,556,804	-				-0.5
1,556,807	+				-0.3
1,556,808	-				-0.1
1,556,857	+				-1.6
1,556,857	+				+0.8
1,556,857	+				+1.4
1,556,857	+				+1.0
1,556,858	-				+0.3
1,556,858	-				-0.9
1,556,861	+				-0.1
1,557,014	+		CA265_RS06340	0.24	+0.3
1,557,101	+		CA265_RS06340	0.33	+0.4
1,557,101	+		CA265_RS06340	0.33	-0.6
1,557,115	+		CA265_RS06340	0.35	+1.7
1,557,127	+		CA265_RS06340	0.36	-0.2
1,557,127	+		CA265_RS06340	0.36	+1.6
1,557,130	+		CA265_RS06340	0.36	+0.8
1,557,163	-		CA265_RS06340	0.40	-1.4
1,557,168	-		CA265_RS06340	0.40	-0.1
1,557,193	+		CA265_RS06340	0.43	+0.1
1,557,242	-		CA265_RS06340	0.48	+0.6
1,557,306	+		CA265_RS06340	0.55	+0.4
1,557,366	-		CA265_RS06340	0.61	-0.9
1,557,367	+		CA265_RS06340	0.61	-1.3
1,557,367	+		CA265_RS06340	0.61	+0.2