Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05260

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,257,365	+		CA265_RS05255	0.70	-1.1
1,257,366	-		CA265_RS05255	0.70	-0.4
1,257,414	-		CA265_RS05255	0.73	+0.2
1,257,481	+		CA265_RS05255	0.78	-1.3
1,257,510	-		CA265_RS05255	0.80	+0.9
1,257,563	+		CA265_RS05255	0.83	-0.0
1,257,589	-		CA265_RS05255	0.85	-0.6
1,257,650	+		CA265_RS05255	0.89	-0.8
1,257,660	+		CA265_RS05255	0.90	+0.5
1,257,661	-		CA265_RS05255	0.90	+0.1
1,257,696	+				-0.3
1,257,696	+				+1.1
1,257,792	-				+0.3
1,257,861	+				+0.2
1,257,963	+				-0.1
1,257,966	+				-0.1
1,257,966	+				+0.1
1,258,028	-				-1.2
1,258,035	+				+1.4
1,258,036	-				+0.6
1,258,280	+				+0.8
1,258,280	+				-0.1
1,258,281	-				+0.4
1,258,284	+				-0.2
1,258,284	+				+0.7
1,258,285	-				+1.4
1,258,348	+				+0.2
1,258,384	+		CA265_RS05260	0.21	-0.3
1,258,453	-		CA265_RS05260	0.52	+0.3
1,258,523	-		CA265_RS05260	0.84	+0.9
1,258,531	-		CA265_RS05260	0.87	+0.1
1,258,557	-				-0.8
1,258,557	-				-0.2
1,258,559	+				-0.0
1,258,560	-				-0.4
1,258,597	-				-0.4
1,258,628	+				-0.5
1,258,818	+				+1.0
1,258,821	-				+0.0
1,258,821	-				+0.5
1,258,821	-				+1.5
1,258,825	-				+0.9
1,258,852	+				-1.4
1,258,860	+				-0.1
1,258,914	+		CA265_RS05265	0.12	-0.3
1,258,914	+		CA265_RS05265	0.12	-0.4
1,258,926	+		CA265_RS05265	0.13	+0.3
1,258,989	-		CA265_RS05265	0.19	-0.1
1,258,998	+		CA265_RS05265	0.20	-0.0
1,258,998	+		CA265_RS05265	0.20	-1.1
1,259,007	+		CA265_RS05265	0.21	+2.7
1,259,008	-		CA265_RS05265	0.21	-0.8
1,259,022	+		CA265_RS05265	0.22	+0.1
1,259,035	-		CA265_RS05265	0.23	-1.0
1,259,051	-		CA265_RS05265	0.25	-0.3
1,259,110	+		CA265_RS05265	0.30	+0.6
1,259,114	-		CA265_RS05265	0.31	+0.5
1,259,116	-		CA265_RS05265	0.31	+0.5
1,259,125	+		CA265_RS05265	0.32	+0.7
1,259,145	+		CA265_RS05265	0.33	-1.6
1,259,174	-		CA265_RS05265	0.36	-0.1
1,259,229	-		CA265_RS05265	0.41	-0.9
1,259,240	+		CA265_RS05265	0.42	+1.2
1,259,240	+		CA265_RS05265	0.42	+0.4
1,259,246	-		CA265_RS05265	0.43	+0.1
1,259,272	+		CA265_RS05265	0.45	-0.1
1,259,273	-		CA265_RS05265	0.45	-0.3
1,259,291	-		CA265_RS05265	0.47	-0.6
1,259,294	+		CA265_RS05265	0.47	+0.1
1,259,294	+		CA265_RS05265	0.47	+0.2
1,259,294	+		CA265_RS05265	0.47	+0.9
1,259,303	+		CA265_RS05265	0.48	+0.3
1,259,330	+		CA265_RS05265	0.50	+0.2
1,259,330	+		CA265_RS05265	0.50	-0.3
1,259,426	+		CA265_RS05265	0.59	-0.0
1,259,470	+		CA265_RS05265	0.63	+0.2
1,259,495	-		CA265_RS05265	0.65	+0.2
1,259,502	+		CA265_RS05265	0.66	-0.7
1,259,504	+		CA265_RS05265	0.66	-0.3
1,259,539	+		CA265_RS05265	0.69	+0.1
1,259,540	-		CA265_RS05265	0.69	-0.8