Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04630

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,104,582	+		CA265_RS04625	0.37	-0.6
1,104,646	-		CA265_RS04625	0.42	+1.1
1,104,674	-		CA265_RS04625	0.44	-0.6
1,104,807	+		CA265_RS04625	0.53	-0.7
1,104,822	+		CA265_RS04625	0.55	+0.4
1,104,822	+		CA265_RS04625	0.55	-0.2
1,104,955	+		CA265_RS04625	0.64	+1.0
1,104,961	-		CA265_RS04625	0.65	+0.1
1,105,113	+		CA265_RS04625	0.76	-1.5
1,105,153	+		CA265_RS04625	0.79	-1.0
1,105,296	+		CA265_RS04625	0.90	+0.3
1,105,297	-		CA265_RS04625	0.90	-0.7
1,105,297	-		CA265_RS04625	0.90	+0.2
1,105,297	-		CA265_RS04625	0.90	+0.2
1,105,305	+				+1.1
1,105,327	-				-0.6
1,105,327	-				-0.6
1,105,331	+				+1.1
1,105,377	+				-1.1
1,105,386	-				-1.3
1,105,386	-				+1.0
1,105,545	+				-0.7
1,105,546	-				-0.2
1,105,557	+				-1.5
1,105,669	-		CA265_RS04630	0.28	+0.1
1,105,669	-		CA265_RS04630	0.28	+0.3
1,105,683	-		CA265_RS04630	0.32	+0.1
1,105,768	+		CA265_RS04630	0.53	-0.2
1,105,768	+		CA265_RS04630	0.53	+0.6
1,105,769	-		CA265_RS04630	0.53	+0.2
1,105,798	+		CA265_RS04630	0.61	-0.6
1,105,853	-		CA265_RS04630	0.74	-0.3
1,105,904	+		CA265_RS04630	0.87	-0.4
1,105,905	-		CA265_RS04630	0.87	+0.7
1,105,908	+		CA265_RS04630	0.88	-2.0
1,105,909	-		CA265_RS04630	0.88	+0.0
1,105,941	-				-0.1
1,105,969	+				-0.4
1,105,974	+				-2.6
1,106,024	+				-1.7
1,106,024	+				-2.5
1,106,025	-				+0.3
1,106,025	-				-0.9
1,106,093	+				-1.1
1,106,110	+				+0.2
1,106,111	-				-0.2
1,106,111	-				-0.2
1,106,115	-				-1.3
1,106,115	-				+1.5
1,106,174	-				-0.8
1,106,194	+				-2.1
1,106,195	-				-0.2
1,106,198	+				-2.2
1,106,215	+				+0.3
1,106,258	+				-0.9
1,106,336	-				-1.8
1,106,433	-		CA265_RS04635	0.11	-1.5
1,106,435	-		CA265_RS04635	0.11	-0.2
1,106,489	+		CA265_RS04635	0.13	-2.1
1,106,489	+		CA265_RS04635	0.13	-0.8
1,106,531	+		CA265_RS04635	0.14	-0.4
1,106,532	-		CA265_RS04635	0.14	-1.9
1,106,728	+		CA265_RS04635	0.21	+2.6
1,106,792	-		CA265_RS04635	0.23	-1.5
1,106,863	+		CA265_RS04635	0.25	+0.0
1,106,864	-		CA265_RS04635	0.25	-3.0
1,106,868	-		CA265_RS04635	0.25	-2.2