Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04370

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,047,736	-		CA265_RS04360	0.60	+1.6
1,047,821	-		CA265_RS04360	0.67	+1.0
1,047,860	+		CA265_RS04360	0.70	+1.1
1,047,861	-		CA265_RS04360	0.70	+2.0
1,047,865	+		CA265_RS04360	0.70	+2.4
1,047,865	+		CA265_RS04360	0.70	-1.2
1,047,884	+		CA265_RS04360	0.72	+1.6
1,047,957	+		CA265_RS04360	0.77	+1.9
1,048,045	+		CA265_RS04360	0.84	+1.6
1,048,046	-		CA265_RS04360	0.84	+1.9
1,048,046	-		CA265_RS04360	0.84	+2.1
1,048,046	-		CA265_RS04360	0.84	+1.1
1,048,098	+		CA265_RS04360	0.88	+1.8
1,048,099	-		CA265_RS04360	0.88	+0.9
1,048,099	-		CA265_RS04360	0.88	+1.8
1,048,140	-				+1.0
1,048,151	+				+2.1
1,048,316	+				-0.6
1,048,316	+				+0.5
1,048,316	+				-0.1
1,048,333	-				+0.4
1,048,381	+				+2.1
1,048,396	+				+0.1
1,048,468	+		CA265_RS04365	0.25	-0.9
1,048,468	+		CA265_RS04365	0.25	+0.1
1,048,577	-		CA265_RS04365	0.66	+0.7
1,048,605	-		CA265_RS04365	0.77	+0.3
1,048,607	-		CA265_RS04365	0.78	-0.4
1,048,609	-		CA265_RS04365	0.78	+0.4
1,048,615	-		CA265_RS04365	0.81	+1.1
1,048,630	+		CA265_RS04365	0.86	+0.2
1,048,743	+				-1.0
1,048,744	-				+0.9
1,048,793	+				-0.8
1,048,950	+		CA265_RS04370	0.21	+1.3
1,048,978	+		CA265_RS04370	0.24	-0.1
1,049,053	+		CA265_RS04370	0.31	-2.0
1,049,053	+		CA265_RS04370	0.31	+0.3
1,049,053	+		CA265_RS04370	0.31	-0.3
1,049,127	+		CA265_RS04370	0.37	+0.2
1,049,135	+		CA265_RS04370	0.38	-0.4
1,049,135	+		CA265_RS04370	0.38	+0.2
1,049,135	+		CA265_RS04370	0.38	-0.6
1,049,136	-		CA265_RS04370	0.38	-0.2
1,049,136	-		CA265_RS04370	0.38	+1.0
1,049,179	-		CA265_RS04370	0.42	+0.6
1,049,209	+		CA265_RS04370	0.45	-0.2
1,049,253	-		CA265_RS04370	0.49	-0.6
1,049,368	+		CA265_RS04370	0.59	+0.6
1,049,398	-		CA265_RS04370	0.62	+1.2
1,049,398	-		CA265_RS04370	0.62	+0.3
1,049,455	+		CA265_RS04370	0.67	+0.2
1,049,459	-		CA265_RS04370	0.68	-0.6
1,049,467	-		CA265_RS04370	0.68	-1.2
1,049,467	-		CA265_RS04370	0.68	-0.5
1,049,468	+		CA265_RS04370	0.68	-1.0
1,049,469	-		CA265_RS04370	0.69	+1.1
1,049,469	-		CA265_RS04370	0.69	-0.5
1,049,469	-		CA265_RS04370	0.69	-0.4
1,049,548	-		CA265_RS04370	0.76	-0.8
1,049,548	-		CA265_RS04370	0.76	-1.2
1,049,570	+		CA265_RS04370	0.78	+1.3
1,049,634	+		CA265_RS04370	0.84	-0.1
1,049,693	-		CA265_RS04370	0.89	+0.1
1,049,731	+				-0.3
1,049,774	-				-1.2
1,049,796	+				+1.0
1,049,796	+				+1.6
1,049,797	-				+0.1
1,049,800	+				+1.1
1,049,800	+				+0.4
1,049,800	-				-0.9
1,049,945	+				+0.5
1,050,074	+				-0.2
1,050,075	-				-0.5
1,050,075	-				-0.1
1,050,167	+				+0.6
1,050,169	+		CA265_RS04375	0.15	+0.1
1,050,439	-		CA265_RS04375	0.34	-1.5
1,050,626	-		CA265_RS04375	0.48	-1.4
1,050,780	-		CA265_RS04375	0.59	-0.1